| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1153 |
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| Symbol | |
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| ID | 7315862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1240159 |
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| End bp | 1241355 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643616040 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_002513226 |
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| Protein GI | 220934327 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCCG ATCTGGACCG TCTGCAGCCC TATCCCTTCC AGAAACTCAC GGAACTGAAG
GCGGGGATCA AGCCACCGGC GCACCTGGAA CACATCGCCC TGTCCATCGG CGAACCCAAG
CACCCCACCC CGGGCTTCAT CGCCGAGACC CTGGCCAGCC ACCTGCACGG CCTGGCCCAC
TACCCCATCA CCCGCGGCGG TGATGCCCTG CGCGAGACCA TCGCCGCCTG GGCCACCCGG
CGCTTCGACC TGCCCGCCGG CAGCCTGGAC GCGGCACGCC ACGTGCTGCC GGTCACCGGC
ACCCGGGAGG CCCTGTTCGC CTTCGCCCAG TGCGTGGTGG ACCGCAGCCG CGACCCGCTG
GTGCTGATGC CCAACCCCTT CTACCAGATC TACGAGGGCG CGGCCCTGCT GGCGGGCGCC
GAGCCCCATT TCCTGAACCT GAGCGCGGAC AACCGCTTCC TGCTGGAGCT GGACGCGGTG
CCGGATGCCG TCTGGAATCG CTGCCAGCTG CTGTATCTGT GCAACCCCGG CAATCCCAGC
GGCGCGGTGA TGGACGAGGC CCACCTGCGC CAGGCCATCG AACTGGCGGA GCGCTTCGAC
TTCGTGATCG CCGCCGACGA GTGCTATTCC GAGATCCACT TCCCGGGCGC CACCCCGCCC
CCGGGCCTGC TGGGCGCCGC CGCGCGCATG GGCAACACCG ACTACCGGCG CTGCGTGGTG
TTCCACAGCC TGTCCAAGCG CTCCAACGTG CCCGGCCTGC GCTCCGGCTT CGTGGCCGGC
GACGCGCAGA TCCTTGAGCG CTTTCACCTG TATCGCACCT ACCACGGCTG CAGCATGGCC
CCGCCCAGCC AGGCGGCCAG CACCGCCGCC TGGGCCGACG AGGCCCACGT GGAGGAGAAC
CGCCAACTGT ACGCGCAGAA GTTCGACGCC ATGCTGGAGA TCCTCGGCGA CGTGCTCAAG
GTCTCGCGCC CGGACGCGGG CTTCTACCTC TGGCCCGAGA CCCCGGTGGA CGACCAGACC
TTCGCCCGGG AGCTGTTCGG GCAGCAGAAC GTCACCGTGC TGCCGGGCAG CTATCTCTCC
CGGGACACCG AGGCCGGCAA TCCGGGACGC AACCGGGTGC GCATGGCCCT GGTGGCCCCC
CTGGACGAAT GCATCGAGGC CGCCGGACGC ATCCGCCGCT TCGTGGAATC CCTTTGA
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| Protein sequence | MNPDLDRLQP YPFQKLTELK AGIKPPAHLE HIALSIGEPK HPTPGFIAET LASHLHGLAH
YPITRGGDAL RETIAAWATR RFDLPAGSLD AARHVLPVTG TREALFAFAQ CVVDRSRDPL
VLMPNPFYQI YEGAALLAGA EPHFLNLSAD NRFLLELDAV PDAVWNRCQL LYLCNPGNPS
GAVMDEAHLR QAIELAERFD FVIAADECYS EIHFPGATPP PGLLGAAARM GNTDYRRCVV
FHSLSKRSNV PGLRSGFVAG DAQILERFHL YRTYHGCSMA PPSQAASTAA WADEAHVEEN
RQLYAQKFDA MLEILGDVLK VSRPDAGFYL WPETPVDDQT FARELFGQQN VTVLPGSYLS
RDTEAGNPGR NRVRMALVAP LDECIEAAGR IRRFVESL
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