Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1150 |
Symbol | |
ID | 7315859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1237516 |
End bp | 1238646 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643616037 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_002513223 |
Protein GI | 220934324 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACA CCCTCGACCT CGCCCAGGAA CTCATCCGCC GCCGCTCCGT GACACCTGAG GATGCCGGCT GCCAGCAGCT CATCGCCGAG CGCCTGGCGC CGCTCGGCTT CGAGGCACAC CACCTGCGCT TCGAGGACGT GGACAACCTC TGGCTGCGCC GGGGCAGCGA GGGGCCGGTG CTGGCCTTCG CGGGCCACAC CGACGTGGTG CCCACCGGCC CCGTTGAGAA GTGGTCCTCG GATCCCTTCC AGCCGCAGAT CCGCAACGGC CAGCTCTACG GCCGCGGCGC TGCGGACATG AAGAGTTCCA TCGCGGCGTT TGTCATCGCC TGCGAGGCCT TTCTCAAGGA TCACCCGGAT CACAAGGGCT CCATCGCCCT GCTCATCACC TCCGACGAGG AGGGCCCGTC GGTGAACGGC ACGGTGAAGG TGGTGGAGTG GCTGGAGGCG CGAGGCGAGA AGATCACCTG GGCCCTGGTG GGCGAACCCT CCAGTACCGA GCGCCTGGGT GACGTGATCA AGAACGGCCG CCGCGGCTCC CTGTCGGGGG TGCTGCGTGT GCGCGGCCAG CAGGGCCACG TGGCCTATCC GCACCTGGCC GACAACCCGG TGCACCGGGC CCTGCCGGCA CTCGCCGAAC TGGCGGCCAT CCAGTGGGAT GAGGGCAATG AACACTTCCC GCCCACCTCC TTCCAGATCT CCAACATCCA CGCCGGCACC GGTGCGGAGA ACGTCATCCC CGGCGAGCTG GAGGTGATGT TCAACCTGCG CTTCTCCACG GAGCAGACCG ATGAAGGCAT CCGCACTCGC GTGCACGCGG TGCTCGATGC CCATGGCCTG GACTATGAAC TCAGCTGGCG ACTCTCCGGC CACCCCTTCC TCACCGCCGA GGGGGAACTG GTGGAGGCGG CCAGCGCCGC CATCCGCGAG GTCATGGGGC TCGACACAGA GCTCTCCACC GCCGGCGGCA CCTCCGACGG GCGCTTCATC GCCCCCACCG GCGCCCAGGT GGTGGAACTG GGGCCCTTGA ACGCCAGCAT CCACAAGATC GACGAACACG TGCGCATCGA GGATCTCGAC GCCCTGTCAC GCATCTACAC CGGCATCCTC AAGCGCCTGC TGGTGGAGTG A
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Protein sequence | MSDTLDLAQE LIRRRSVTPE DAGCQQLIAE RLAPLGFEAH HLRFEDVDNL WLRRGSEGPV LAFAGHTDVV PTGPVEKWSS DPFQPQIRNG QLYGRGAADM KSSIAAFVIA CEAFLKDHPD HKGSIALLIT SDEEGPSVNG TVKVVEWLEA RGEKITWALV GEPSSTERLG DVIKNGRRGS LSGVLRVRGQ QGHVAYPHLA DNPVHRALPA LAELAAIQWD EGNEHFPPTS FQISNIHAGT GAENVIPGEL EVMFNLRFST EQTDEGIRTR VHAVLDAHGL DYELSWRLSG HPFLTAEGEL VEAASAAIRE VMGLDTELST AGGTSDGRFI APTGAQVVEL GPLNASIHKI DEHVRIEDLD ALSRIYTGIL KRLLVE
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