| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1144 |
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| Symbol | |
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| ID | 7315853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1229657 |
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| End bp | 1231372 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643616031 |
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| Product | signal transduction protein |
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| Protein accession | YP_002513217 |
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| Protein GI | 220934318 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCCG TAGCCGCCCA CCCCCTGCGC CTGTTGCTGG TGGAGGATTC CGAGAACGAC
GCTGTGCTGG TGTTGCGCGC GTTGCAGCGG GGAGGTTTTT CCCCGGACTG CACCCGGGTG
GACAGCATCG AGCAACTGCA GACAGCCCTG GAGAGCGGGC ACGCCTGGGA CCTGATCATC
ACCGATCACA ATCTGCCCGG CTTCGATTCC GGCCACTGCC TGCGCCTGGT CCGGGAACGG
GATCAGGACA TCCCTGTGAT CATCGTCTCC GGCAGCATCG GCGAGGAGAT CGCCGTCAGC
GCCATGCGCA ACGGTGCCCA GGACTACATC CTCAAGGACA ACCTGTCCCG ACTCGCCCCG
GCCATAGACC GGGAACTGCG CGACCACGAG GTGCGCCGCC AAAACCGGCA GGCCCAGGAA
GCCATCAACC ACCTGGCCCT GCACGACTCG CTCACCGGCC TGATCAATCG CCATGGCTTC
GAGACCCGGC TCAAGGAGGC GCTGGCCAAG GCCCGGCGGC AGCGTCCCAG CGCACTGCTC
TACATCGACC TGGACCAGTT CAAGCTGGTC AACGACACCT GCGGGCACCA GGCCGGCGAT
GACCTGCTGC GACAATTGGC CAGCCTGTTG CAGATCCCGG TGCGGGAACA CGACACCCTG
GCCCGTCTGG GGGGTGATGA GTTCGGTGTG CTGCTGGACG AATGTACCCT CGAGCAGGCC
GAACAGGTGG CCCGGCGCAT GCTCTCCATC GTCAACGATT TTCGCTACAC CTGGGGTGAG
CACAATTTCC GCATCGGTGC CAGCATCGGG CTGACCCTGC TCGACGACCC TGATCTGTCG
CTCTCCGATG TCATGCGCCA TGCGGACATG GCCTGCTACG CGGCCAAGGA CAAGGGACGA
AACCGCGTCC ACCTGTTCCG GGAAGACGAT CGCACGCTCA TGGCCCGGCA CAGCGAGATG
CAATGGACCG CGCGCATCAA CGAGGCCCTG GAGCAGGATC GTTTCCTGCT CTACTACCAG
GAAATCCATC CGCTCAAACC GGACACCGCC GGCCATTGCG AGATCCTGTT GCGCATGCTC
GACCCGAGCG GTGAAGTGAT CTCACCCTGG GCCTTCATCC CGGCGGCGGA ACGCTACAAC
CTCATGCCCA CCGTGGACCG CAAGGTACTG GAACTGACGC TGCCGCGCAT ACGCCAGCTG
CTGAGGGAAG GACAAGTGCC GAAGGGTTAC CGCTGGTTCA TCAACCTGTC CGGCCTGACC
CTGGGCGATG ATGCGTTCCT GGCTCACGTC ACCGAGCGCC TGAGAGAACA TGCCATCCCA
CCCGAGGCGC TGGGTTTCGA GATCACGGAG ACGGCCGTGA TCGCCAACCT GGGCAATGCC
GTTCGTTTCA TCCAGCGGAT GCGCGATCTC GGCTGCCACG TGGCCCTGGA CGACTTCGGC
ACCGGCCTGA GTTCCTTCTC CTACCTGTCC AACATCCCTG CGGACTACAT CAAGATCGAC
GGTGGATTCG TGCGCGACAT GCACGAGAAC GAGATGCACC AGGCCATCGT GGAGGCGATC
AACCGCATCG GCCACGTGGC CGGACTGAGG ACCATTGCGG AGTTCGTGGA GACGGAAGGG
GTACGCCAGC GTCTGGCGCA ACTGGGGGTG GATTATGCCC AGGGATACGG CATCGCCCGG
CCCAGACCAT TGCCGCACAT CGCCCGGCAA CCCTGA
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| Protein sequence | MDSVAAHPLR LLLVEDSEND AVLVLRALQR GGFSPDCTRV DSIEQLQTAL ESGHAWDLII
TDHNLPGFDS GHCLRLVRER DQDIPVIIVS GSIGEEIAVS AMRNGAQDYI LKDNLSRLAP
AIDRELRDHE VRRQNRQAQE AINHLALHDS LTGLINRHGF ETRLKEALAK ARRQRPSALL
YIDLDQFKLV NDTCGHQAGD DLLRQLASLL QIPVREHDTL ARLGGDEFGV LLDECTLEQA
EQVARRMLSI VNDFRYTWGE HNFRIGASIG LTLLDDPDLS LSDVMRHADM ACYAAKDKGR
NRVHLFREDD RTLMARHSEM QWTARINEAL EQDRFLLYYQ EIHPLKPDTA GHCEILLRML
DPSGEVISPW AFIPAAERYN LMPTVDRKVL ELTLPRIRQL LREGQVPKGY RWFINLSGLT
LGDDAFLAHV TERLREHAIP PEALGFEITE TAVIANLGNA VRFIQRMRDL GCHVALDDFG
TGLSSFSYLS NIPADYIKID GGFVRDMHEN EMHQAIVEAI NRIGHVAGLR TIAEFVETEG
VRQRLAQLGV DYAQGYGIAR PRPLPHIARQ P
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