| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1073 |
|---|
| Symbol | |
|---|
| ID | 7315782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1159562 |
|---|
| End bp | 1161223 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643615961 |
|---|
| Product | DNA polymerase III, subunits gamma and tau |
|---|
| Protein accession | YP_002513147 |
|---|
| Protein GI | 220934248 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTATC AGGTTCTTGC CCGCAAATGG CGTCCGCGCA GTTTCGAGGA GATGGTGGGC
CAGCCCCACG TGGTGCGCGC CCTCTCCAAT GCCCTGCGCG ACCAGCGCCT GCACCACGCC
TACCTGTTCA CGGGGACCCG CGGCGTGGGC AAGACCACCG TGGCCCGGGT GCTGGCCAAG
TGCCTGAACT GCGAGACGGG GGTGACCGCC ACCCCCTGCG GCCAGTGCAG CGCCTGTCGT
GAGATCGACG AGGGGCGCTT CATCGACCTG ATCGAGGTGG ATGCCGCCTC CCGCACCAAG
GTGGAGGACA CCCGCGAACT GCTCGACAAC GTGCAGTACG CCCCCACCCG GGGCCGCTAC
AAGGTGTACC TCATCGACGA GGTGCACATG CTCTCCACCC ACAGTTTCAA CGCGCTGCTC
AAGACCCTGG AAGAGCCGCC GCCCCACGTG AAGTTCCTGC TGGCCACCAC GGACCCGCAG
AAACTGCCGG TCACCATCCT GTCCCGCTGC CTGCAGTTCA GCCTCAAGGC CATGCCCGCG
GACATGGTCG GCGCGCACCT GAAGAAGGTG CTGGAGCAGG AGGGGGTGGA TTTCGATCCG
CCTGCCATCA TGCGCCTGGC CCGGGCCGCC TCGGGCAGCA TGCGCGATGC CCTCAGCCTG
CTGGACCAGG CCATTGCTTA TGGCAGCGGC GCCCTTCGCG ACGACGACGT GCGCGAGATG
CTCGGTGCCA TCTCCCAGGA CCACCTGGAG CGCATGCTGC AGGCCCTGGC GGCCGGTGAC
GGACCCGCCC TGATGGGGGC CGTGGATGAC CTGGCCCAGC GGGCCCCGGA CTACAACGCG
ATACTTGGGG AACTGGTGTC CCTGCTGCAC CAGGTGGCCC TGGCCCAGCA GGTGCCCGAG
GCCCTGGACG AGGGCGCGGT GGACGTGGCG GCGGTGCAGG CTATGGCCCG GAGCCTGGCC
CCCGAGGACG TGCAGCTCTA TTACCAGATC GCCCTGCTGG CCCGGCGCGA CCTGCCCCTG
GCCCCCGATC CCCGGGCGGG CTTCGAGATG GCCCTGCTGC GCATGCTGGC CTTCCGGCCG
GCGGGTGCCG GGGAGGCCGC GACAGCCTCG TCAGTGCGCA GCCGGCCAGC GCCGGAACCC
CGCAGCGAGA CCCAGACACG GGCACCGGTC GGGCACGCGC GCAGCGCGAC GACACCGGAG
CCGGCACCTG CGGTGCGCGA ACCCCGCATG CCCGAACCCG CAGTCTCTCG TCCGGCACCG
GCCCCGACCT CGACGGCGGC CCCCGGTGGG CTCGACTGGG TGGCCACGGT GGCGGCCATG
GGACTGGCTG GCCCGGTCTT GAACCTGGCC AACCACTGCG CCGTGGGCCG CCACCAAGAT
GGAGAACTGG TGCTGAGCCT GGCCTCCCGG CACGAGACCC TGAAATCCGC AAACAGCGAA
CGGCGCCTGA TCGAGGCGGT CAGACAGTAT CTGGGTGAAG ACCTCAAGGT ACGTATCGAG
ATCGGCGAGC CCACGGCGGA GACCCCGGCA CAATCCCAGG TGCGCGCCTC GGAGGAACGT
CAGCGGGCGG CGGAGGCGGC GGTGGCTGGC GATGAACTGA CCGCCCGTCT GGGCGAGGTC
TTCGGTGCCC AGGTGGTGCC GGGCTCCGTG AAACCCGTGT GA
|
|---|
| Protein sequence | MSYQVLARKW RPRSFEEMVG QPHVVRALSN ALRDQRLHHA YLFTGTRGVG KTTVARVLAK
CLNCETGVTA TPCGQCSACR EIDEGRFIDL IEVDAASRTK VEDTRELLDN VQYAPTRGRY
KVYLIDEVHM LSTHSFNALL KTLEEPPPHV KFLLATTDPQ KLPVTILSRC LQFSLKAMPA
DMVGAHLKKV LEQEGVDFDP PAIMRLARAA SGSMRDALSL LDQAIAYGSG ALRDDDVREM
LGAISQDHLE RMLQALAAGD GPALMGAVDD LAQRAPDYNA ILGELVSLLH QVALAQQVPE
ALDEGAVDVA AVQAMARSLA PEDVQLYYQI ALLARRDLPL APDPRAGFEM ALLRMLAFRP
AGAGEAATAS SVRSRPAPEP RSETQTRAPV GHARSATTPE PAPAVREPRM PEPAVSRPAP
APTSTAAPGG LDWVATVAAM GLAGPVLNLA NHCAVGRHQD GELVLSLASR HETLKSANSE
RRLIEAVRQY LGEDLKVRIE IGEPTAETPA QSQVRASEER QRAAEAAVAG DELTARLGEV
FGAQVVPGSV KPV
|
|---|
| |