| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1005 |
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| Symbol | truB |
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| ID | 7316582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1087219 |
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| End bp | 1088142 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643615892 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002513080 |
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| Protein GI | 220934181 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.319279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC CCAAGATCCA GCGCCGGGAC GTGCATGGCA TCGTGTTGCT GGACAAGCCC
CAGGGCTACA GTTCCAACCA GGCCCTGCAG CGGGTGAAGT ATCTGTTCCG GGCGCGCAAG
GCGGGTCATA CCGGCAGCCT GGATCCGCTG GCCACCGGCC TGCTGCCCCT GTGCTTCGGC
GAGGCCACCA AGGTGTCGGG CTTCCTGCTG GACGCGGACA AGCATTACCG CACCCGTTGC
CGCCTGGGAC AGACCACCGA CACCGCCGAT GCCGAGGGCC AGGTGCTGGC GACCCGGCCG
GTGCCGGCCC TGGACGAGGC GCTGATCGAG GCCGCCCTGG CCCCGTTCCG CGGCCCCATC
CACCAGGTGC CGCCCATGTA CTCGGCGCTC AAGCACCAGG GGCAACGGCT CTACGAACTG
GCCCGTAAGG GCGAGGAAGT GGAGCGCAAG GCCCGGGATG TCACCATCCA TGCCCTGAGC
TGCCTGGGAT TCACGGCGGA CACCCTGGAG CTGGACGTGC ACTGTTCCAA GGGCACCTAC
ATCCGCACCC TGGTGGAGGA CATCGGCGAG CGGCTCGGCT GTGGTGCCCA CGTGATCGAG
TTGCGCCGTC TGGGGCTCGG GCCCTTCGAG GCCCCGGCCA TGGTCACCCT GGAGGAGATT
GAGGCCCGCG CGGAGCAGGG CGAGGCGGCC CTGGATGCCC TGCTGGCCCC CATCGACAGC
GCGCTCACCC AGTGGCCGGC GGTGCGCCTG GACCGGGACA GCGCCTATTA CCTTCGCCAG
GGTCAGGCGG TGTTCGTGCC CGGCGCGCCG ACCCGGGGCA TGGTGCGGGT CTATGGCCCG
GGGGAGACCT TCCTGGCCAT GGGCGAGATC CTGGACGATG GCCGGGTGGC CCCCCGGCGT
CTGATGATGA TGGGGCAGGC CTGA
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| Protein sequence | MNKPKIQRRD VHGIVLLDKP QGYSSNQALQ RVKYLFRARK AGHTGSLDPL ATGLLPLCFG
EATKVSGFLL DADKHYRTRC RLGQTTDTAD AEGQVLATRP VPALDEALIE AALAPFRGPI
HQVPPMYSAL KHQGQRLYEL ARKGEEVERK ARDVTIHALS CLGFTADTLE LDVHCSKGTY
IRTLVEDIGE RLGCGAHVIE LRRLGLGPFE APAMVTLEEI EARAEQGEAA LDALLAPIDS
ALTQWPAVRL DRDSAYYLRQ GQAVFVPGAP TRGMVRVYGP GETFLAMGEI LDDGRVAPRR
LMMMGQA
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