| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1002 |
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| Symbol | nusA |
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| ID | 7316579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1082369 |
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| End bp | 1083874 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615889 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_002513077 |
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| Protein GI | 220934178 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAG AGATCCTGAT GGTGGTGGAC GCCGTTTCCA ACGAGAAGGG CGTCGAGAAG
GAAGTGATCT TTGAGGCCAT CGAGGCCGCG CTCGGCTCCG CCACGCGCAA GAAGCACGGC
GGCGAGATCG ACGTGCGCGT CAGCATCCAC CGGGAGACCG GCGACTACGA GACCTTCCGC
CGCTGGCTGG TGGTGGACGA CGAGGACCCG GAATTCGAGA GCCCGGAGCG CCAGAAGCTG
CTGTCCTACG CGCACCAGAC CCATCCCGAC ATCCAGGTGG GCGAGTACAT CGAGGAGCCC
ATGGAATCCG TGGACTTCGG ACGCATCGCC GCCCAGACCG CCAAGCAGGT GATCGTGCAG
AAGGTGCGCG AGGCCGAGCG TGCCAAGGTG GTCGAAGAGT TCAGACACCG GGTCGGCGAG
CTGGTGATGG GCGTGGTCAA GCGCACCGAG CGCAGCGGCG TGTTCCTGGA CCTGGGCGGC
AATGCCGAGG CCTTCATCCC CCGCGAGGAG ATGATCCCCC GGGAGACGGT GCGCCCCAAC
GATCGCCTGC GCGGTTACCT CAAGGAGGTG CGTTCCGAGC CCCGCGGCCC GCAGCTGTTC
GTCAGCCGCA CGGCGCCGGA ATTCCTCATC GAGATGTTCA AGCTGGAAGT GCCCGAGGTG
GGCCAGGGCC TGATCGACAT CATGGGCGCC GCCCGTGACC CGGGTCTTCG CGCCAAGATC
GCGGTGCGTT CCAATGATTC GCGCCTGGAT CCCGTGGGCG CCTGCGTGGG CATGCGCGGT
TCCCGGGTGC AGTCGGTGTC CAACGAGCTG GCCGGCGAGC GCGTCGACAT CATTCTCTGG
GACGATAACC CGGCCCAGTT CGTGATCAAT GCCATGTCGC CCGCCGAGGT GCTGTCCATC
GTCATGGACG AGGACCGCCA CAGCATGGAC ATCGCCGTGG CCGAGGAGAA GCTCTCCCAG
GCCATCGGGC GGGGCGGGCA GAACATCCGC CTGGCCTCCC AGCTCACCGG TTGGGAACTG
AACGTGATGA ACGAGGCCCA GGCCGCCGAG AAGAGCGAGG CCGAGGCCGC CGAGCTGCAG
CGCATGTTCA TGGAGAACCT GGACGTGGAC GAGGAGGTCG CCGCCATCCT GGTCCAGGAA
GGTTTCTCCA GCATCGAGGA AGTGGCCTAC GTGCCCACCT CGGAGATCAT GCAGATCGAG
GAGTTCGACG AGGAGATCGT CGAGGAGCTG CGTGCCCGTG CCCGGGACGC CCTGCTCACC
AAGGCCATCG CTACGGAGGA ACAGGGTGGC GGTGAGCCCG CCGAGGACCT GCTCAACATG
GAGGGCATGG ACCGGGATCT GGCCTTCAAG CTGGCTGCCA AGGGCATCTG CACCATGGAA
GATCTGGCCG AGCAGGCCGT GGACGACCTG GTGGAGATCT CCGGTCTGGA CGCCGAGAAG
GCCGGCGAGC TGATCATGAC CGCCCGGGCG CCCTGGTTCG CGGAGGATGC GGGCGAGGCC
AAGTAA
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| Protein sequence | MNKEILMVVD AVSNEKGVEK EVIFEAIEAA LGSATRKKHG GEIDVRVSIH RETGDYETFR
RWLVVDDEDP EFESPERQKL LSYAHQTHPD IQVGEYIEEP MESVDFGRIA AQTAKQVIVQ
KVREAERAKV VEEFRHRVGE LVMGVVKRTE RSGVFLDLGG NAEAFIPREE MIPRETVRPN
DRLRGYLKEV RSEPRGPQLF VSRTAPEFLI EMFKLEVPEV GQGLIDIMGA ARDPGLRAKI
AVRSNDSRLD PVGACVGMRG SRVQSVSNEL AGERVDIILW DDNPAQFVIN AMSPAEVLSI
VMDEDRHSMD IAVAEEKLSQ AIGRGGQNIR LASQLTGWEL NVMNEAQAAE KSEAEAAELQ
RMFMENLDVD EEVAAILVQE GFSSIEEVAY VPTSEIMQIE EFDEEIVEEL RARARDALLT
KAIATEEQGG GEPAEDLLNM EGMDRDLAFK LAAKGICTME DLAEQAVDDL VEISGLDAEK
AGELIMTARA PWFAEDAGEA K
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