Gene Tgr7_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0980 
Symbol 
ID7315011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1059873 
End bp1060496 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content66% 
IMG OID643615865 
Productribosomal RNA methyltransferase RrmJ/FtsJ 
Protein accessionYP_002513055 
Protein GI220934156 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGAA GCAAAAGCAG CCACCGCTGG CTCAAGGAGC ATTTCGACGA CGAGTACGTC 
AAACGTGCCC AGCAGGAGGG CTACCGCTCC CGCGCCGTCT ACAAGCTCCA GGAGATCCAG 
GAGCGGGATC GCCTCCTGCG CCAGGGCATG ACCGTGGTGG ACCTGGGCGC CGCCCCGGGC 
GGCTGGACCC AGTACGCGGC GGGCCTGGTG GGTAAGCACG GGCGGGTGGT GGCCTCGGAC 
ATCCTGCCCA TGGACCCCCT GCCGGGGGTG ACCATCGTCG AAGGGGACTT CCGCGAGGCC 
GAGGTGCTGG AACGCCTGCT GGCCGTGCTG GGCGAGGGCG GGGCAGACCT TGTGATGTCG 
GACATGGCCC CCAATATGAG TGGTATGGAC GCGGTGGATC AGCCCCGCGC CATGTACCTG 
GCGGAACTGG CGGCGGAACT GGCGCGCACG GTGCTGAAAC CGGGCGGGGA TTTTCTGGTC 
AAACTTTTCC AGGGCGCCGA ATTCGACGAG TACGTCCGGA TGCTGCGCAC CGAATACGAT 
AAAGTCAGCA TACGCAAACC CAAGGCCTCA AGACCCCGCT CCCGTGAGGT GTATGCGGTG 
GCCCGGGGCC GGAAAGTGGT GTAA
 
Protein sequence
MPRSKSSHRW LKEHFDDEYV KRAQQEGYRS RAVYKLQEIQ ERDRLLRQGM TVVDLGAAPG 
GWTQYAAGLV GKHGRVVASD ILPMDPLPGV TIVEGDFREA EVLERLLAVL GEGGADLVMS 
DMAPNMSGMD AVDQPRAMYL AELAAELART VLKPGGDFLV KLFQGAEFDE YVRMLRTEYD 
KVSIRKPKAS RPRSREVYAV ARGRKVV