Gene Tgr7_0962 details

Gene Information

• Locus tag: Tgr7_0962
• Symbol: smpB
• ID: 7314993
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: -
• Start bp: 1040326
• End bp: 1040799
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643615847
• Product: SsrA-binding protein
• Protein accession: YP_002513037
• Protein GI: 220934138
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGAAAC AGGCCAAACA AGCGGGCACC AGCACCATTG CGCTCAACAA GAAGGCGCGC 
CACGAATACT TCATCGAGGA ACGCTTCGAG GCGGGCCTCG CCCTGGAGGG CTGGGAGGTC 
AAGAGCCTGC GAGACGGGCG CGTGCAGCTC AACGAGAGCT ACGTGCTCAT CAAGGACGGC 
GAGGCCTGGC TGTTCGGCGC CCACATCAGC CCCCTGCCCA CCGCCTCCAC CCACATCCAC 
CCCGACCCCA TGCGCAGCCG CAAGCTGCTG CTGCACAAGG AAGAACTCAA CAAGCTCATC 
GGCCAGGTGG AGCGCAAGGG CTACACCCTG ACCCCGCTCG CGCTCTACTG GAAGCGCGGC 
CGGGCTAAGC TGGAGATCGG CCTCGCCAAG GGCAAGAAGG AACATGACAA GCGCGCCACC 
ATCAAGGACC GGGACTGGCA GCGGGAGAAG GAACGGGCGC TGAAGAAGGG TTGA 

 

Protein sequence

MSKQAKQAGT STIALNKKAR HEYFIEERFE AGLALEGWEV KSLRDGRVQL NESYVLIKDG 
EAWLFGAHIS PLPTASTHIH PDPMRSRKLL LHKEELNKLI GQVERKGYTL TPLALYWKRG 
RAKLEIGLAK GKKEHDKRAT IKDRDWQREK ERALKKG