Gene Tgr7_0945 details

Gene Information

• Locus tag: Tgr7_0945
• ID: 7314976
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: +
• Start bp: 1018767
• End bp: 1020668
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643615830
• Product: PpiC-type peptidyl-prolyl cis-trans isomerase
• Protein accession: YP_002513020
• Protein GI: 220934121
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0760] Parvulin-like peptidyl-prolyl isomerase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.863309
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCAGA AGATCAGAGA CAAGGCCACG GGCTGGATTG CCTACGTCAT CGTCATCCTC 
ATCAGTATCC CCTTCGCCCT CTGGGGCCTG AACGAATACT TCGGCGGCGC CCCTGCCCAG 
GTGGTGGCCG AGGTCAACGG CGTGGAGATC CCCGCCCGGG CCTACCAGCA GGAATTCCAG 
CAGCAGCGCC AGCAACTGGC GCAGATGTTC GGCGGCCGCA TCCCCTCGGG GGCGGTGGAC 
GAGAACATGA TGCGGGAGAA CGCCCTGCAG ACCCTGATCC GGCGCGAACT GGTGGCGCAG 
ATGGCCGAGG ACAAGGGTTT CCGCATCAGC GCCTCGGCCG TGGCCAGCGA GATCCGCGCC 
GTGCCCGGTT TCCAGCGTGA CGGCGTGTTC GACCCGGAAC GCTATCGCCA GATCATGGAG 
TCACAGCGCC GCAGCCCGGC GGAGTTCGAG GCCCGGGTGG CCCAGGCCAT GCTGCTGGAG 
CAGTTCCAGA GCGGCTACCA GCGCAGTGCC TTCCTGCCCG AGGCCATGGT GGAGGACTTC 
GTGCGCCTGC GCCACGAGCG CCGCCAGGTC AGCGTGCACC GCTTCCCGGC CGAGGCCTAT 
GCCGAGCGGG TGCAGGTGAG CGAGGATGAC ATAGCCGCCT TCTACGCCGA GCACGGCGAG 
CAGTTCCAGA CCCCGGAACG CCTGCGTCTC GCCTACCTGC TGCTGGACGA CGCCACCCTG 
GCCGAACAGG TCAGCGTGAC CGAGGATGAT CTGCGCCGCG AGTACGAGCA ACGCAGCGAC 
CGCTTCACCC AGCCGGAGGA GCGCCGCGCC AGCCATATCC TGATCCGCGT CGAGCCGGGT 
GCGGATGCCG ATACCGTGGC CGCCGCTGAG GCACGCGCCC GGGAAGCGCG GGCGCGCATC 
GAGGCCGGCG AGGACTTTGC CGAGGTGGCC CGTGCCGTGT CCGACGATCC CATGGCCGAG 
ACGGCCGGTG GCGATCTGGG CTACATCGCC CGGGGCGATA TCGATCCCAC CCTGGAGGGC 
GTGCTGTTCA CGATGCGGGT GGGTGACGTG AGTCAGCCGG TGCGCACGGG TCTGGGCCTG 
CAGATCGTCA GGCTCACGGA CATCGAGGCC GCCAGGCGCG AACCCTTCGA GGCGGTGCGC 
GACGAAGTGG AGGCGGAGTT CCGCAGCCGC CGCGTGGAAG GCCTGCACAT CGAACTGACC 
GAGCGTCTGC TCACCGAGAG CTTCGAACAG CCCGGCACCC TGGAACCGGC CGCCGAGGCC 
ACGGGGCTCT CCATTGCCTT CACCGACTGG TTCACCCGCC AGGGCGCTGA CGAGGGCATT 
GCCTCGGAGC CCGAGGTGCT GCGGGTGGCC TTCAGCCAGG AGGTCCGTCA GGGCCGCAAC 
AGCGACCTGA TCGATCTGCC CGACGGGCGC GTGGTGGTGG TGCGCCTGCA CGAGTACGAG 
CCCGCCGCGC CCCGGCCCCT GGAGGAGGTG GCCGAGGAGA TCCGCCTGCA ACTGGTGTGG 
GAGGAAAGCC GCAGGCTGGC CGAGGCCGAC GGCGCCCGGG CGCTGGAGGC ACTGCAGGCC 
GGCAGCGGCT GGGCGCAGAG CCTGGAGGGT CTGCCCGGTG AGAGCACCAC GGAGCTGTGG 
GTCAGCCGGG ATTCCGGTGA ACTGCCGGGC GCCGTGACCA GCCGGGTGTT CACCCTGAAC 
CGGCCCGCCG ACGATCGGCC CGTTTTCTCC GGCCTGTCCC TGCGCGATGG CGATTACGTG 
CTCGTCGCCC TGTACGCCAG CGAGCCCGGC GAGGTGCGCC CGGCGCGCAT GAACGAGGCC 
CGGCAGCAGC TGGCCAATCT CTATGGCGGC CTGGAGTTCG AGGCCCTCTA CCAGGCCCTG 
GAGGCGCAGG CGAAGATCCG CATCTTCAGG GAAAACCTGT GA 

 

Protein sequence

MLQKIRDKAT GWIAYVIVIL ISIPFALWGL NEYFGGAPAQ VVAEVNGVEI PARAYQQEFQ 
QQRQQLAQMF GGRIPSGAVD ENMMRENALQ TLIRRELVAQ MAEDKGFRIS ASAVASEIRA 
VPGFQRDGVF DPERYRQIME SQRRSPAEFE ARVAQAMLLE QFQSGYQRSA FLPEAMVEDF 
VRLRHERRQV SVHRFPAEAY AERVQVSEDD IAAFYAEHGE QFQTPERLRL AYLLLDDATL 
AEQVSVTEDD LRREYEQRSD RFTQPEERRA SHILIRVEPG ADADTVAAAE ARAREARARI 
EAGEDFAEVA RAVSDDPMAE TAGGDLGYIA RGDIDPTLEG VLFTMRVGDV SQPVRTGLGL 
QIVRLTDIEA ARREPFEAVR DEVEAEFRSR RVEGLHIELT ERLLTESFEQ PGTLEPAAEA 
TGLSIAFTDW FTRQGADEGI ASEPEVLRVA FSQEVRQGRN SDLIDLPDGR VVVVRLHEYE 
PAAPRPLEEV AEEIRLQLVW EESRRLAEAD GARALEALQA GSGWAQSLEG LPGESTTELW 
VSRDSGELPG AVTSRVFTLN RPADDRPVFS GLSLRDGDYV LVALYASEPG EVRPARMNEA 
RQQLANLYGG LEFEALYQAL EAQAKIRIFR ENL