| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0930 |
|---|
| Symbol | |
|---|
| ID | 7314954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 999085 |
|---|
| End bp | 1000266 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643615808 |
|---|
| Product | O-succinylhomoserine sulfhydrylase |
|---|
| Protein accession | YP_002513005 |
|---|
| Protein GI | 220934106 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATC CCCAGGATTA CGCCTTCGAG ACCCGCGCCG TGCGGGCCGG TCAGCACCGC
ACCAACGAGG GTGAGCACTC GGAGGCCATC TTCCCCACCT CCAGCTTCGT GTTCGAGAGC
GCGGCCCAGG CGGCGGCCCG CTTCGGCGGC CAGGAGCCGG GCAACATCTA CTCGCGCTTC
ACCAACCCCA CGGTGCGCAC CTTCGAGCAG CGCCTCGCGG CCATGGAGGG GGGCGAGGCC
TGCGTGGGCA CCGCCTCGGG CATGGCGGCG ATCCTCGCCA CCTGCATGGC ACTGCTCAAG
GCGGGCGATC ACATCGTCTC CTCCAAGGCG GTGTTCGGCA CCACCACCTC GCTGTTCAAC
ACCTACCTTA CCCGTTTCGG CGTGGCGGTG AGCTTCGTGC CGCTCGCGGA TCTCGCCGCC
TGGGAGGCGG CCATCCGCCC CGAGACGCGC ATGCTGTACG TGGAATCCCC GTCCAACCCG
CTCACCGAGC TGGTGGACAT CCGCGCCCTG GCGGAGCTGG CCCACGCCCG GGGTTGCCTG
CTGGTGGTGG ACAACTGTTT CTGCACCCCG GCCCTGCAGC AGCCCCTGGC CCTGGGCGCC
GACATCGTGA TCCATTCCGC CACCAAGTAC CTGGACGGCC AGGGCCGCTG CGTGGGCGGC
GCGGTGGTGG GCGACGCGGA GCGGGTGGGC AAGGAGGTGT TCGGTTTCCT GCGCACCGCC
GGCCCCACCA TGAGCCCGTT CAACGCCTGG GTGTTCCTCA AGGGGCTCGA GACCCTGAGC
CTGCGCATGC GCGCCCATTG CGAGAACGCC CTGGTGCTGG CCCGCTGGCT GGAATCCCTG
CCCCAGGTGG AGCGGGTCTA CTACCCGGGC CTGGAGAGCC ATCCCCAGCA CGATCTGGCC
AAGCGCCAGC AGTCGGGCTT CGGCGGCATC GTCTCCTTCG AGGTCAAGGG CGGGCGCGAG
GCGGCCTGGC GGGTGATCGA CGCCACCGAG ATGCTCTCCA TCACCGCCAA CCTGGGGGAT
GCCAAGACCA CCATCACCCA CCCGGCCACC ACCACCCATG GCCGGCTGAC GCCCGAGCAG
CGGGAGGCCC AGGGCATCCG GGAGGGACTG ATCCGGGTGG CGGTGGGCCT GGAAGCCATC
GCGGACATCC AGAAGGATCT GGCTCGCGGC CTCGGCGGCT GA
|
|---|
| Protein sequence | MKDPQDYAFE TRAVRAGQHR TNEGEHSEAI FPTSSFVFES AAQAAARFGG QEPGNIYSRF
TNPTVRTFEQ RLAAMEGGEA CVGTASGMAA ILATCMALLK AGDHIVSSKA VFGTTTSLFN
TYLTRFGVAV SFVPLADLAA WEAAIRPETR MLYVESPSNP LTELVDIRAL AELAHARGCL
LVVDNCFCTP ALQQPLALGA DIVIHSATKY LDGQGRCVGG AVVGDAERVG KEVFGFLRTA
GPTMSPFNAW VFLKGLETLS LRMRAHCENA LVLARWLESL PQVERVYYPG LESHPQHDLA
KRQQSGFGGI VSFEVKGGRE AAWRVIDATE MLSITANLGD AKTTITHPAT TTHGRLTPEQ
REAQGIREGL IRVAVGLEAI ADIQKDLARG LGG
|
|---|
| |