Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0867 |
Symbol | |
ID | 7315890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 932991 |
End bp | 934835 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643615746 |
Product | TrkA-C domain protein |
Protein accession | YP_002512945 |
Protein GI | 220934046 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.18544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGCACGG ATCAATGGTT GCTGGCCGGG GTGCTGCTCG CCACCCTGGT GTTGTTCCTC TGGGGACGCT GGCGCCATGA CGTGGTTGCG GTGGCGGCCC TGCTGGCGAG CGTCGCCCTA GGCCTGGTGC CTTCCGCCGA GGCCTTCTCC GGCTTTGCCC ACCCCGCGGT GATCACCGTG GCCTGCGTGC TGGTCCTGAG CCACGGGCTG CAGACCTCCG GCGCCGTAGA CGCGCTGGTG CGCCGGGTCA TGCCCGGCGC CGCCGGTCCG ACACTCACCA TTGCCGTGCT CACGGGGCTC GGCGCCCTGC TGTCCGGTTT CATGAACAAC GTGGGCGCGC TCGCCCTGCT CATCCCGGTG GCCCTGCAAG TGGCCGCGCG CATGGAGGTG GCGCCTGCAC GGGTGCTCAT GCCGCTGGCC TTCGGCACCA TCCTGGGCGG CATGATCACC CTGGTGGGTA CGCCGCCCAA CCTGATCGTC TCGGGATTTC GCGCCGAGGC GGGCCTGGGC CCCTTCGGCA TGTTCGATTT CACCCCGGTG GGCCTGGCGG TGGCGGCCCT GGGCGTGCTG TTCGTGGCCC TGGTGGGCTG GCGCCTGGTG CCGGCCCGCA AGCCGGGTGC GGAAGGTTTC GAGACCGAGG CCTATCTCAC CGAGGTGCGC GTGCACGAGG ACAGCGAGCT GGCCGGACGC TGCCTGCGGG ATGTGGACGA GAAACTCAGG GACCAGGATG CCCATGTGGT GAGCCTCGTG CGTCACGAGG TGCGCATGGT GGCGCCCCAT CCGGGCCGCA GGATCCATGC TGGCGACATC CTGGTGATCC AGGCCGAGGC CGAGGCCCTG GCGGGGGTGC TGGGCAGTCT GGGGCTCAAG CTGGAAGAGG CCGTCGCGCC GGAGGAGGAC GAAGGGGAGG CGGTCGAGAT CGCCAGCACC TCGAAGCACG AGGTCAAGGC CAGTAAGGAC CAGGAGGTCG AGGAGGAAGC ACCCAGGGAG GACGAGATCG GCCTGGTGGA ACTGGCCGTC CTGCCCCAGT CCTCGGTGAT CGGACGGACC CCCAGTGACA TCCAGTTGCG CACCCGCTAT GGCATCAACC TGCTGGCCAT CTCCCGTCAG GGCCGGCGTT CCGCCACTCG CCTGCGGGCA ACGCCCCTGC GCGCGGGGGA CGTGCTGCTC ATGCAGGGTT CGCCGGAAGC GATCTCGGAA TTCGCCGCCA ACGCGGGTTG CGTGCCCCTG GCGGAGCGCG CGCTGACCAT CCCGGATCGT CGCAAGGCGA TCCTCGCCAC GGGCATCATG GGCATGGCGG TGGCGGCGGC CACCCTGGGC GTGCCCGCCG CCCTGGCCTT TGCCGCCGGG GTGCTGCTGT CCCTGCTGGT GCGTACCGTC GCCCTGCGTC AGGTCTATCA GTCGGTGGAC TGGCCGGTGG TGGTGCTGCT GGCGGCGCTG ATCCCCGTGG CCGGCGCCAT GCAGGCCACC GGGCTTGCCG GCCTGGTCGC CCAGTTCATG GTGGACACCC TGGCCCAGGG CCACGTGATC GTCGCGCTGC TGCTGATCCT GGTGGTGACC ATGATGCTCT CGGACCTGAT GAACAACGCC GCCACGGCGG CAGTCATGTG TCCCATCGCC ATCGGCATCG CCGGCCAGCT GGGGGTGAAC GTGGATACCT TCCTGATGGC CGTGGCGGTG GGTGCCTCCT GCGCCTTCCT CACCCCTATC GGCCATCAGA ACAACACCCT CATCCTGGGA CCGGGCGGCC TGCGTTTCGG GGATTACTGG CGGTTGGGCC TGCCGCTGGA GGTACTGGTG GTGGCGGTGG CGGTGCCCAT GCTTCTGATC GTCTGGCCGC TGTGA
|
Protein sequence | MSTDQWLLAG VLLATLVLFL WGRWRHDVVA VAALLASVAL GLVPSAEAFS GFAHPAVITV ACVLVLSHGL QTSGAVDALV RRVMPGAAGP TLTIAVLTGL GALLSGFMNN VGALALLIPV ALQVAARMEV APARVLMPLA FGTILGGMIT LVGTPPNLIV SGFRAEAGLG PFGMFDFTPV GLAVAALGVL FVALVGWRLV PARKPGAEGF ETEAYLTEVR VHEDSELAGR CLRDVDEKLR DQDAHVVSLV RHEVRMVAPH PGRRIHAGDI LVIQAEAEAL AGVLGSLGLK LEEAVAPEED EGEAVEIAST SKHEVKASKD QEVEEEAPRE DEIGLVELAV LPQSSVIGRT PSDIQLRTRY GINLLAISRQ GRRSATRLRA TPLRAGDVLL MQGSPEAISE FAANAGCVPL AERALTIPDR RKAILATGIM GMAVAAATLG VPAALAFAAG VLLSLLVRTV ALRQVYQSVD WPVVVLLAAL IPVAGAMQAT GLAGLVAQFM VDTLAQGHVI VALLLILVVT MMLSDLMNNA ATAAVMCPIA IGIAGQLGVN VDTFLMAVAV GASCAFLTPI GHQNNTLILG PGGLRFGDYW RLGLPLEVLV VAVAVPMLLI VWPL
|
| |