| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0848 |
|---|
| Symbol | trmD |
|---|
| ID | 7315871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 912268 |
|---|
| End bp | 913026 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643615727 |
|---|
| Product | tRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_002512926 |
|---|
| Protein GI | 220934027 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCATCG ACGTGGTGAC ACTCTTCCCG GATCTGGTGA ACTGCGTCTC GGGATGCGGG
GTCACGGGAC GGGCGGTGGA GCGGGGCATC CTGGACCTGC ACTGCTGGAA CCCGAGGGAC
TACACCGAGG ACCGGCACCG CACGGTGGAT GACCGGCCCT ATGGCGGCGG CCCCGGCATG
GTGATGAAGG TGGAGCCCCT GCGGCGCGCC ATCCACGATG CCCGGCAGGC GGACACGGTC
CCACCCCTGG TGGTCTATAT GAGCCCCCAG GGACGCAGAC TGGACCAGGA CGCCGTGCAG
CGGCTGGCCG ATCTGCCCCG GCTGATATTG ATCGCCGGAC GCTACGAGGG CATCGACGAG
CGTCTGGTGG AACTGGAAGT GGATGAGGAA TGGTCCATTG GTGACTATGT CCTCTCCGGC
GGCGAACTGG CCGCCATGGT GGTGATCGAC GCCTGCGCAA GGCTGCTGCC GGGGGCGCTG
GGTGACGAGG ATTCGGCGCA GCAGGACTCG TTCATGACGG GCCTGCTGGA CTGCCCGCAC
TACACGCGCC CGGAGGTCTA CGAGGGGCGC GGCGTGCCGC AGGTGCTGCT CGGCGGGCAT
CATGCCGAGA TCGAGCGCTG GCGGCGCAAG CAGGCCCTGG GCCGGACCTG GCAAAGGCGC
CCGGACCTGC TGGAACACAG GGTTTTGGAC GAGGCGGATC AACGCCTTCT GGATGAATAT
CGACGCGAGC TCGCAGATGC GGATCGCAGC AAGCAGTGA
|
|---|
| Protein sequence | MRIDVVTLFP DLVNCVSGCG VTGRAVERGI LDLHCWNPRD YTEDRHRTVD DRPYGGGPGM
VMKVEPLRRA IHDARQADTV PPLVVYMSPQ GRRLDQDAVQ RLADLPRLIL IAGRYEGIDE
RLVELEVDEE WSIGDYVLSG GELAAMVVID ACARLLPGAL GDEDSAQQDS FMTGLLDCPH
YTRPEVYEGR GVPQVLLGGH HAEIERWRRK QALGRTWQRR PDLLEHRVLD EADQRLLDEY
RRELADADRS KQ
|
|---|
| |