Gene Tgr7_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0847 
Symbol 
ID7315870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp911496 
End bp911999 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content66% 
IMG OID643615726 
Product16S rRNA processing protein RimM 
Protein accessionYP_002512925 
Protein GI220934026 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0806] RimM protein, required for 16S rRNA processing 
TIGRFAM ID[TIGR02273] 16S rRNA processing protein RimM 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGGC GTTCCATCGT GCTGGGCCGG GTGACCGGCC TTTACGGCGT TCAGGGCTGG 
GTCAAGGTGT TTTCCGAGAC CCGGCCCCGT GAAGAGATCG TCCGCTACAA CCCGGTCCTG 
CTGGGACACG AGGGGCAGTG GCGGGAAACC CGGGTGGTGG GCGGCAAGGC CCACGGCAAG 
GGTGTGGTGA TGAAATTCCA GGGTTGCGAT GACCGCGACG CGGCCGCGGC CCTGATGGGG 
CAGGAGATCG CCGTCTGGCG TGAACAGCTG GCGCGACTGC CGAAGGGCGA ATACTACTGG 
GCCGACCTGG TGGGGCTCGA GGTGGTCACC ACCGGGGGCG AGTCGCTCGG TGTGGTGGAC 
AGTCTTTTCG AGACCGGGGC CAACGACGTG ATCGTGGTCA AGGGTGATCG GGAACGGTTG 
ATCCCCTACG TACGCGGTGA GTTCGTCCGC GACGTGGACC TGGAGGCCGG CACCCTGACG 
GTGGACTGGG ACCCGGAGTT CTAG
 
Protein sequence
MERRSIVLGR VTGLYGVQGW VKVFSETRPR EEIVRYNPVL LGHEGQWRET RVVGGKAHGK 
GVVMKFQGCD DRDAAAALMG QEIAVWREQL ARLPKGEYYW ADLVGLEVVT TGGESLGVVD 
SLFETGANDV IVVKGDRERL IPYVRGEFVR DVDLEAGTLT VDWDPEF