| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0815 |
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| Symbol | |
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| ID | 7315076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 880458 |
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| End bp | 881405 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643615694 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002512893 |
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| Protein GI | 220933994 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.689288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCGGAG AGCTTGAAGT CATTCATTTA CAGGGGGAAG TGCCCGAGGC GCTGTCCGGT
CAGAGGTTGG ACGCCGCCCT GGCGCGCATG TTCCCCAGCT ATTCCCGCAG CCGCATCCAG
CAGTGGATGG AGGCGGGCTG GGTGCGTGTG GACGGCGAGA CGCCGCGTCG CCGGGACACC
GCCCTGGGCG GTGCCCGGGT GGTGATCGAG GCCCGGGTGG AGGCGGCCTC CGAGGATCGG
GCCGAGGACA TCCCCCTGGA GGTGATCTAC GAGGACGACA GTCTGCTGGT GATCAACAAG
CCGCCGGGCC TGGTGACCCA TCCCGCCGCC GGCAACCGGG AGGGCACCCT GGTCAATGCC
CTGCTGCACC ACGCCCCGGA TCTCGCCGCG CTGCCCCGGG CGGGCATCGT GCACCGCCTG
GACAAGGAGA CCTCCGGTCT GCTGGTGGTG GCGCGCACCC TGGAGGCCCA CACGGACCTG
GTGCGCCAGC TCCAGGCGCG CACCGTGGGC CGGGAATACC TGGCCCTGGT GCAGGGCGTG
ATCGTGGCCG GCGGCACCGT GGATGCGCCC ATCGGGCGCC ACCCGGTGGA CCGCAAGCGC
ATGGCGGTGG TCGCCGGCGG CAAGGAGGCC ATCACCCATT ACCGGGTGGA GGCGCGCCTC
CCCCACCACA CCCTGCTGCG GGTGAGACTG GAGACCGGCC GCACCCACCA GATCCGGGTG
CACATGGCCC ACGTCCATCA TCCCATCGTG GGCGATCCGG TCTACGGCGG GAGACTCAAG
GTGCCCGCAG GCCTGTCCGA GGCGGACCAG GCGGTCCTGC GCGGCTTCCG TCGCCAGGCC
CTGCATGCGG CGCGCCTGGA GCTGGTGCAT CCCGTCACCG GCGAGGAGAT GGGCTGGGAG
GCGCCCATGC CTGCGGATTT CGCGGCGCTG CTGGAGGCGC TGTGTTGA
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| Protein sequence | MSGELEVIHL QGEVPEALSG QRLDAALARM FPSYSRSRIQ QWMEAGWVRV DGETPRRRDT
ALGGARVVIE ARVEAASEDR AEDIPLEVIY EDDSLLVINK PPGLVTHPAA GNREGTLVNA
LLHHAPDLAA LPRAGIVHRL DKETSGLLVV ARTLEAHTDL VRQLQARTVG REYLALVQGV
IVAGGTVDAP IGRHPVDRKR MAVVAGGKEA ITHYRVEARL PHHTLLRVRL ETGRTHQIRV
HMAHVHHPIV GDPVYGGRLK VPAGLSEADQ AVLRGFRRQA LHAARLELVH PVTGEEMGWE
APMPADFAAL LEALC
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