| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0814 |
|---|
| Symbol | |
|---|
| ID | 7315075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 879473 |
|---|
| End bp | 880237 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643615693 |
|---|
| Product | putative competence lipoprotein precursor |
|---|
| Protein accession | YP_002512892 |
|---|
| Protein GI | 220933993 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.658327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCAGT TCATCCTGCT CCTGCTCGTC TCCCTGCTGT CCCTCACCCT GGTCGCCGGC
TGCGGCGCCA ACCGTCAGGA TCCCACCCGC GACTGGTCCG CGAGCCAGCT CTACACCGAG
GCCCGCGCGG CCCTGGACCG GGGCAACTTC GACCAGGCGG TGAGTTATTA CGAGAGCCTG
GAGGCCCGCT TCCCCTTCAG CCGCTTCGCC CAGCAGGCCC AGCTGGAAGT GGCCTACGCC
TATCACAAGG CCGACGAGCC GGAGATGGCC CTGGCCGCCG CCGATCGCTT CATCCAGATC
AACCCGCGGC ATCCCTACGT GGACTACGCC TACTACCTCA AGGGCCTGGT GAATGCCAAC
CGCGGCCAGG GCTACCTGCA GCGCTGGTTC CCCCGGGATC CCAGCAGCCG CAACCCGGCC
CACCTGCGCC AGGCCTTCGA TGACTTCTCC ACCCTGGTGG GCAACTTCCC GGACAGCCGC
TATGCCGAGG ACGCCCACCA GCGCCTGATC TACCTGCGCA ACATGCTCGC GGCCCACGAG
CTGCACGTGG CGAACTTCTA CATGCGTCGG GGGGCGTGGC TCGCCGCCGC CCAGCGCGCC
CGCACCGTGA TCGAGCGCTA CCCGGAGGCC GACTCCAACC TGGATGCCCT GGAGGTCATG
GTGCGTGCCT ACCGGGAACT GGAGCTGAAC GACCTGGCGA ATGATGCCCT GCGGGTCCTG
ACGCTGAACG ATCCGGAACG GGCCGCCCGA CTGCAGAACC GCTGA
|
|---|
| Protein sequence | MRQFILLLLV SLLSLTLVAG CGANRQDPTR DWSASQLYTE ARAALDRGNF DQAVSYYESL
EARFPFSRFA QQAQLEVAYA YHKADEPEMA LAAADRFIQI NPRHPYVDYA YYLKGLVNAN
RGQGYLQRWF PRDPSSRNPA HLRQAFDDFS TLVGNFPDSR YAEDAHQRLI YLRNMLAAHE
LHVANFYMRR GAWLAAAQRA RTVIERYPEA DSNLDALEVM VRAYRELELN DLANDALRVL
TLNDPERAAR LQNR
|
|---|
| |