| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0810 |
|---|
| Symbol | |
|---|
| ID | 7315071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 875735 |
|---|
| End bp | 876601 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643615689 |
|---|
| Product | succinyl-CoA synthetase, alpha subunit |
|---|
| Protein accession | YP_002512888 |
|---|
| Protein GI | 220933989 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.674167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATTC TGATCGACAA AGACACCAGG GTGATCTGCC AGGGCTTTAC CGGCAAGCAG
GGCACCTTCC ACTCGGAGCA GGCGATCGCC TACGGCACGC GCATGGTGGG CGGTGTCACG
CCGGGCAAGG GCGGTCAGAA GCACCTGGAC CTGCCGGTGT TCGACACCGT TCACGATGCG
GTGCGTGACA CCGGCGCCGA GGCCACCATG ATCTACGTGC CGGCGCCGTT CGCGGCGGAC
GCGATCCTGG AGGCCATGGA CGCGGGCATT CAAGTGATCG TGTGCATCAC CGAGGGTATC
CCGGTGCTGG ACATGCTGCG GGTCAAGGCG GCCCTGGCCC ACAGCGACGC GCGCCTGATC
GGTCCCAACT GCCCCGGTGT GATCACGCCC GGCGGCTGCA AGATCGGCAT CATGCCCGGC
CACATCCACC AGCCCGGTCG GGTGGGCATC GTGTCCCGTT CCGGAACGCT CACCTACGAG
GCGGTGAAGC AGACCACCGA CGCGGGTCTG GGCCAGAGCA CCTGCGTGGG CATCGGCGGA
GACCCCATCC AGGGCATGAA CTTCGTGGAC TGCCTGGCGC TGTTCCAGGC CGATCCGCAA
ACCGAGGGCA TTATCCTGGT GGGCGAGATC GGCGGCACGG CGGAGGAAGA AGCGGCCGCC
TACATCAAGG CCCACGTCAC CAAGCCCGTG GTCGCCTACA TCGCCGGCGT GACCGCACCG
CCCGGACGGC GCATGGGCCA TGCCGGCGCC ATCATCTCCG GCGGCCAGGG CACGGCGGAA
CAGAAGTTCG CCGCCCTGGA GGCCGCCGGC GTCTCCGTGG TGCGTTCGCC TGCGGAGATG
GGCGAGCGTA TGAAGACGCT GCTGTGA
|
|---|
| Protein sequence | MSILIDKDTR VICQGFTGKQ GTFHSEQAIA YGTRMVGGVT PGKGGQKHLD LPVFDTVHDA
VRDTGAEATM IYVPAPFAAD AILEAMDAGI QVIVCITEGI PVLDMLRVKA ALAHSDARLI
GPNCPGVITP GGCKIGIMPG HIHQPGRVGI VSRSGTLTYE AVKQTTDAGL GQSTCVGIGG
DPIQGMNFVD CLALFQADPQ TEGIILVGEI GGTAEEEAAA YIKAHVTKPV VAYIAGVTAP
PGRRMGHAGA IISGGQGTAE QKFAALEAAG VSVVRSPAEM GERMKTLL
|
|---|
| |