| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0787 |
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| Symbol | |
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| ID | 7315048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 846723 |
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| End bp | 848372 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643615667 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_002512866 |
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| Protein GI | 220933967 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGG CCGACGCCGG AAAGGCGGTT GAGGCTGCAC AAAAGAAGCG CGTCCCCCTG
GTTGCCTATC TGGTAGACAA CAAGCTGGTG GAATCCAGGC GGGTCGCTCA GGCCGCCGCC
GAGGAGTTCG GCACCCCGGT CTTCGACCTG GATAGCTTCG ACAAGGAACT CCTGCCCAAG
AAGCTGGTGG ACGAGAAGCT GGTCCGCCAG CACCATGCCC TCCCCCTGTT CAAGCGCGGC
AACCGGCTGT TCGTCGGGAT CGCCGACCCC ATGAACCTCA CCGCCCTGGA CGAGATCAAG
TTCAACACCG GTATCGCCAC CGAACCGGTG CTGGTGGAAC AGGACAAACT GGGCAAGCTG
ATCGAGGAAA GCCTCAACGA CACCGGCGCA GTCATGGAAG GCCTCATGGA CGACGATCTC
GACAACCTCG AGATCAGCGC CGATGACGAC GACAGGAAAG GCGAGGTGAC GGAAAGCGAG
GTGGACGACA CCCCGGTAGT CCGCTTCGTC AACAAGGTGT TACTGGATGC CATCAACCGC
AAGGCCTCGG ACATTCACTT CGAGCCCTAC GAGAAAGAAT TCCGGGTTCG TCTGCGCATG
GACGGCGTGC TCCACGAAGT GGCCAAACCC CCAGTATCCC TGTCGCCACG CATCATCGCC
CGCATCAAGG TCATGTCCCG CATGGACATC TCCGAGCGCC GCATCCCCCA GGACGGGCGC
ATCAAGATGC AGCTCTCCAA GAGTCGGGCC ATCGACTTTC GTGTCAACAC CTGCCCCACG
CTCTACGGCG AAAAGGTGGT ATTGCGCATC CTCGACCCCA CCAGCGCCTC CTTAGGCATC
GACGTGCTGG GTTATGAGGA AGAACAGAAA AAGCTTTACC TGGATGCCCT GAGCAAACCC
TACGGCATGA TCCTGGTCAC CGGCCCGACC GGCTCCGGCA AGACCGTCTC CCTTTACACG
GGCCTTGGCA TCCTGAACAC CCCGGATCGC AACATCTCCA CCGCCGAGGA CCCGGCCGAG
ATCAACATGC CCGGGATCAA CCAGGTGAAC GTCAACCCCA AGGTGGGCCT GACCTTCGCC
TCTGCCCTGC GCGCCTTCCT GCGCCAGGAC CCGGACGTGA TCATGGTGGG CGAGATCCGT
GACCTGGAAA CCGCCGAGAT CGCCATCAAG GCGGCACAGA CCGGCCACCT GGTGCTCTCC
ACCCTGCATA CCAACGACGC CCCCCAGACC CTGACCCGTC TGGCTAATAT GGGGGTGCCG
CCCTACAACA TCGCCTCCTC AATCCTCCTT ATCATCGCCC AGCGACTTGC CCGGCGGCTG
TGCAACCACT GCAAGACCGT CGATGATGTG CCCAAGGATG TGCTGCTACA GGAAGGGTTC
ACAGAGGATG ACTTTAAGGA CGGCATCAAG ATCTACAAGG CCGTGGGCTG CGACCAGTGT
ACCAATGGCT ACAAGGGGCG CGTGGGCATC TACCAGGTGC TGCCCATCTC CGAGGCCACC
CAGCGCCTCA TCCTGGAGGG TGGCAACTCC ATGCAGCTCG CCGAGCAGGC CCGCAAGGAA
GGCATCAACG ACCTCCGCCG CGCCGGTCTG CTCAAGGTCA AGGCCGGGAT GACCAGCCTT
GAAGAGATCA ACCGCGTGAC CAAGGACTGA
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| Protein sequence | MAEADAGKAV EAAQKKRVPL VAYLVDNKLV ESRRVAQAAA EEFGTPVFDL DSFDKELLPK
KLVDEKLVRQ HHALPLFKRG NRLFVGIADP MNLTALDEIK FNTGIATEPV LVEQDKLGKL
IEESLNDTGA VMEGLMDDDL DNLEISADDD DRKGEVTESE VDDTPVVRFV NKVLLDAINR
KASDIHFEPY EKEFRVRLRM DGVLHEVAKP PVSLSPRIIA RIKVMSRMDI SERRIPQDGR
IKMQLSKSRA IDFRVNTCPT LYGEKVVLRI LDPTSASLGI DVLGYEEEQK KLYLDALSKP
YGMILVTGPT GSGKTVSLYT GLGILNTPDR NISTAEDPAE INMPGINQVN VNPKVGLTFA
SALRAFLRQD PDVIMVGEIR DLETAEIAIK AAQTGHLVLS TLHTNDAPQT LTRLANMGVP
PYNIASSILL IIAQRLARRL CNHCKTVDDV PKDVLLQEGF TEDDFKDGIK IYKAVGCDQC
TNGYKGRVGI YQVLPISEAT QRLILEGGNS MQLAEQARKE GINDLRRAGL LKVKAGMTSL
EEINRVTKD
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