Gene Tgr7_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0712 
Symbol 
ID7318059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp769244 
End bp771118 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content67% 
IMG OID643615592 
Productputative methyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002512791 
Protein GI220933892 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTCA AGATGCGACT GACGTTGCTG GCCCTGGGTG CCCTGCTGTT TGCCTCCATC 
GCCCTGATCA GCACCGCCCG CATGGCCCAG AACGAGGCGG AGCAGCGTTT CGAATCACTG
GTGATGAGCA GCAAATCCCA GCTCTGGGAG AAGATCATCC GTACCGAGAT GGAACGCATG
CGCACCGGCA TGCAGGGCCT GACCCGGGAC CGCAACACCC TGGCGGCCAT GGCCTCCGGC
GACCGCGCCG CCCTGGCCGA CAACGCCCGG CCCACCTTCA ACCGCCTGAG CGCCTCCGAG
ACCATCTCCC GCCTGCAGCT CACCGACACC CGGGGCCAGA TCCTGTTCTC CGCCCCCGGC
GAGTTCAGTG GCGAGACCCG CAAATCCCTG GTTGCACAGG CCCTCGAAGA ACGCGCCGTG
GTACAGGGGG TCCAGCGGGA CGAGGACGGC ACCCTGGTCT CGGTGCTGGC CTTCCCCATG
TACCAGCGCG GCCAGCTGGC GGGCGCCGGT GTATTCATGC GCACCCTGGA CACGGCCCTG
GCCGACCTGT CTGCCGCCGA TGAATCCCAC AACTACGTGG TCAGCCCCCG TCAGGGCACG
GAATACTCCA CCGACGAGGA CGAACAGTTC TATGGGAGCC TGGGCCTTGA GCTGCCGGCC
CTGGGCAGCG AACTGGTCAC CCGGGCCCAC CACGACGGAT TCGGCTACTC GGTGTTGGTG
CGCCCCATCA ACGCCCCGGA CGGCCAGCCC CTGGCCCACC TGGTGAGTGT CAACGACTTC
ACCGAAAGCT TCTCTCAGCA ATCGCGCATC AATCTCATGG CCATCGTCAT CACCGTGGTG
GTGATCCTGG TCCTGGGTCT GCTCATCTAC TGGTACACCC ACCGGGCCTT CGCCCCCCTG
CTGGCCGCCG TGGACACCCT GGACGCCATC GCACAGGGCG ATCTGACCCA CGACCTGCCC
GAAGTGAACC GGCGCGATGA GACCGGGCGC CTGATGACCG CCATGCGCAC CATGCTCCTG
CGCCTGCGGG ACATGATCAA CGAGGTCAAT GCGGCCACCG GCCAGGTGGC GGCGGCGGCG
GAACAGATGT CCGCCACCAC CCAGGAGACC AGTGCCGGCA TCCAGCGCCA GCGCAGTGAA
ATCGAACTGC TGGCCACCGC CATGACCGAG ATGAGCCAGA CCACCCAGGA TGTGGCCCGC
AACGCCAACG AGGCCGCCGA CTCAGCCAAC TCAGCCAAGG ACGAATCATC CAGCGGCGAG
AAGGTCGTGC GCCAGACCAT CGGTGCCATC GAGGACCTGG CCAGTTCCGT GGAGGAGACC
GCCCAGGTCA TTCACCGCCT GGAGAGCGAC ACCGACAACA TCCGCGTGGT GCTGGACGTG
ATCCGCGGCA TCGCCGAACA GACCAACCTG CTGGCCCTCA ATGCCGCCAT CGAGGCGGCC
CGGGCCGGCG AACAGGGCCG CGGCTTCGCC GTAGTGGCCG ACGAGGTGCG CACCCTGGCC
ACCCGCACCC AGGATTCCAC CCAGGAGATC CAGCGCATCA TCGAACAGCT CCAGGGGGGT
GCCGGGGAGG CGGTCAAGGC CATGGAAGGT GGACGCAGCA AGGCCCAGAA GACGGTGGAA
GAGGCCGCCC TGGCCGGAGA ATCACTCACG CGGATCCGTG CCGCCGTGGA CACCATCACC
GACATGAACC ACCAGATCGC CAGCGCCGCA GAGGAACAAA GCGCCGTGGC CGACAACATG
AACCAGAGCG TGGTTACCAT CAACCACGTG GCCGAGGAGA CCAGCGCAGG CGCCCTGCAG
ACCGCCAACG CCTCCGAAGA ACTGGCCCAG CTGGCCCTCA GGTTGCAGCA GCTCGCCGGA
CATTTCCGCA CCTGA
 
Protein sequence
MSLKMRLTLL ALGALLFASI ALISTARMAQ NEAEQRFESL VMSSKSQLWE KIIRTEMERM 
RTGMQGLTRD RNTLAAMASG DRAALADNAR PTFNRLSASE TISRLQLTDT RGQILFSAPG
EFSGETRKSL VAQALEERAV VQGVQRDEDG TLVSVLAFPM YQRGQLAGAG VFMRTLDTAL
ADLSAADESH NYVVSPRQGT EYSTDEDEQF YGSLGLELPA LGSELVTRAH HDGFGYSVLV
RPINAPDGQP LAHLVSVNDF TESFSQQSRI NLMAIVITVV VILVLGLLIY WYTHRAFAPL
LAAVDTLDAI AQGDLTHDLP EVNRRDETGR LMTAMRTMLL RLRDMINEVN AATGQVAAAA
EQMSATTQET SAGIQRQRSE IELLATAMTE MSQTTQDVAR NANEAADSAN SAKDESSSGE
KVVRQTIGAI EDLASSVEET AQVIHRLESD TDNIRVVLDV IRGIAEQTNL LALNAAIEAA
RAGEQGRGFA VVADEVRTLA TRTQDSTQEI QRIIEQLQGG AGEAVKAMEG GRSKAQKTVE
EAALAGESLT RIRAAVDTIT DMNHQIASAA EEQSAVADNM NQSVVTINHV AEETSAGALQ
TANASEELAQ LALRLQQLAG HFRT