| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0578 |
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| Symbol | |
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| ID | 7317926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 608724 |
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| End bp | 610631 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643615463 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002512662 |
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| Protein GI | 220933763 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.104527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAGT ATCGTTCCCG CACCACCACC CATGGCCGCA ACATGGCCGG CGCCCGGGCC
CTGTGGCGCG CCACGGGCAT GAAGGACGGC GACTTCGACA AGCCCATCAT CGCCATCGCC
AACTCCTTCA CCCAGTTCGT GCCCGGCCAC GTGCACCTGA AGGACCTGGG CCAGATGGTG
GCCCGGGAGA TCGAGAAGGC CGGCGGCGTG GCCAAGGAGT TCAACACCAT CGCCGTGGAC
GATGGTATCG CCATGGGTCA CGGCGGCATG CTCTATTCCC TGCCTTCCCG GGAGATCATC
GCCGACGCCG TGGAGTACAT GGTCAACGCC CACTGCGCCG ACGCCCTGGT GTGCATCTCC
AACTGCGACA AGATCACCCC CGGGATGCTC AATGCCGCGC TGCGCCTGAA CATCCCCGTT
GTGTTCGTCT CCGGCGGCCC GATGGAATCC GGCAAGGCGA TCATCGGTGG CAAGGAGGTG
CACCTGGACC TGGTGGACGC CATGGTCTCC GCCGCCAATC CGAAAGAGTC CGATGCGGAC
GTGATGGAAA TGGAACGCTC GGCCTGCCCC ACCTGCGGCT CCTGCTCGGG CATGTTCACC
GCCAACTCCA TGAACTGCCT GACCGAGGCC CTGGGCCTGT CCCTGCCGGG CAACGGCTCG
ACCCTGGCCA CCCACGCCGA TCGCCGGGAA CTGTTCCTGA GGGCCGGGCG GCTGGTGGTG
GAGCTGGCCA AACGCTATTA CGAGCAGGAC GACGCATCGG TCCTGCCCCG ATCCATCGCC
AGCTTCGAGG CCTTCGAGAA CGCCATGTGC CTGGACATCG CCATGGGCGG TTCCACCAAC
ACCGTGCTGC ATCTGCTGGC CGCGGCCCAG GAGGCGGGGG TGGATTTCAC CATGGCCGAC
ATCGACCGCC TGTCACGCAA GGTGCCGAAT ATCTGCAAGG TCGCGCCGGC CACCCAGAAA
TACCACATGG AGGACGTGCA CCGGGCCGGC GGCGTGATGG GCATCCTGGG CGAGCTGGAC
CGCGGCGGCC TGCTGCACCG CGACGTGCCC ACCGTGCACA GCCGGACCCT GGGTGAGGCC
CTGGAGACCT ACGACGTGAT GCGTACCGGC GACGAGGCGG TGAAGACCTT CTTCCGCGCC
GGCCCCGGCA ACGTGCGCAC CACCGAGGCC TTCAGCCAGG ACAAGCGCTG GCCGAGTCTT
GACCTGGACC GGGAGAACGG CTGCATCCGC GACATCGAGC ACGCCTACAG CCGGGACGGC
GGCCTGGCCG TGCTCTACGG CAACATCGCC CCCGAGGGCT GCGTGGTGAA GACCGCGGGC
GTGGACATGA GCATGTTCGA GGCCCACGAG CTGCGCTACA CCACCAGCGT GCCCACTTCC
ACGTTGCGCG GCTTCGTGGG TCCGGCGCGC ATCTTCGAAA GCCAGGACGC GGCCGTGGAG
GCGATCCTGG GCGACCGGAT CAAGTCCGGC GATGTGGTCA TCATCCGCTA CGAGGGGCCG
CGCGGCGGAC CGGGTATGCA GGAGATGCTC TACCCCACCA GCTATCTCAA GTCCAAGGGC
CTGGGCAAGG AGTGCGCGCT GATCACCGAC GGGCGCTTCT CCGGCGGCAC CTCCGGCCTG
TCCATCGGCC ATGTCTCGCC TGAGGCGGCC GAGGGCGGCC CCATCGGTCT GGTGGAGGAG
GGCGACCTGA TCGAGATCGA CATCCCGGGC CGGAACATCA ACGTGGCGGT CTCCGACGAA
GTGCTGGCCG AGCGCCGCAG GGCCATGGAG GCCAAGGGTA GCGATGCCTG GAAGCCGATC
GGCCGCGAGC GGGTGGTGTC GAACGCCCTG AAGGCCTACG CCGCCATGAC CACCTCCGCC
TCGCGGGGCG CGGTGCGGGA TGTGTCTCAG CTTGAGAGAA AACGGTAG
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| Protein sequence | MPQYRSRTTT HGRNMAGARA LWRATGMKDG DFDKPIIAIA NSFTQFVPGH VHLKDLGQMV
AREIEKAGGV AKEFNTIAVD DGIAMGHGGM LYSLPSREII ADAVEYMVNA HCADALVCIS
NCDKITPGML NAALRLNIPV VFVSGGPMES GKAIIGGKEV HLDLVDAMVS AANPKESDAD
VMEMERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS TLATHADRRE LFLRAGRLVV
ELAKRYYEQD DASVLPRSIA SFEAFENAMC LDIAMGGSTN TVLHLLAAAQ EAGVDFTMAD
IDRLSRKVPN ICKVAPATQK YHMEDVHRAG GVMGILGELD RGGLLHRDVP TVHSRTLGEA
LETYDVMRTG DEAVKTFFRA GPGNVRTTEA FSQDKRWPSL DLDRENGCIR DIEHAYSRDG
GLAVLYGNIA PEGCVVKTAG VDMSMFEAHE LRYTTSVPTS TLRGFVGPAR IFESQDAAVE
AILGDRIKSG DVVIIRYEGP RGGPGMQEML YPTSYLKSKG LGKECALITD GRFSGGTSGL
SIGHVSPEAA EGGPIGLVEE GDLIEIDIPG RNINVAVSDE VLAERRRAME AKGSDAWKPI
GRERVVSNAL KAYAAMTTSA SRGAVRDVSQ LERKR
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