| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0571 |
|---|
| Symbol | |
|---|
| ID | 7317919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 601724 |
|---|
| End bp | 602128 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643615456 |
|---|
| Product | transcriptional regulator, TraR/DksA family |
|---|
| Protein accession | YP_002512655 |
|---|
| Protein GI | 220933756 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAG ATCTTCCCGA GGGTTATCGA CCCTCCGAGT CCGAGCCCTA CATGAGCCCG
ATGCAGCTGG CCTATTTCCG GCGCAAGCTG TTGCAGTGGC GGGATGAACT GCTCGACGAG
TCCGAGGAGA CCATCCGCAA CCTGCGCAAC GAGGAATGGC GCGAGCCCGA TCCCAACGAC
CGGGCCAGCC GGGAGAGCGA CGCGAGCCTG GAACTGCGCA CCCGCGACCG CTACCGCAAG
CTGATCGGCA AGATCGACGC CGCCCTGCGG CGCATCGATG ATGGCAGTTA CGGCTATTGC
GAGGAGACCG GCGAGCCCAT CGGCCTGCCG CGCCTGGAGG CCCGCCCCAT CGCCACCCTC
ACCGTCGAGG CCCAGGAGCG CCACGAGCGG GACGAGCGGC GGTAG
|
|---|
| Protein sequence | MQEDLPEGYR PSESEPYMSP MQLAYFRRKL LQWRDELLDE SEETIRNLRN EEWREPDPND
RASRESDASL ELRTRDRYRK LIGKIDAALR RIDDGSYGYC EETGEPIGLP RLEARPIATL
TVEAQERHER DERR
|
|---|
| |