| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0526 |
|---|
| Symbol | |
|---|
| ID | 7317710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 557494 |
|---|
| End bp | 558345 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643615409 |
|---|
| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| Protein accession | YP_002512610 |
|---|
| Protein GI | 220933711 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGCT GGAGCACCAA CTGGCCGGCC CCGGCCAAGC TCAACCTGTT CCTGCACATC
ACCGGCCGAC GGGGCGACGG CTATCACCTG CTGCAGACCG TCTTCCAGCC CCTGTCCGTG
GGCGACAGCC TGGATTTCCT GTGCCTGGAC GAGGACGCGG TGCGCCTGGA GACCCCGCTG
CCGGGTGTCG CGCCGGAGCA GGACCTGGTG GTGCGCGCCG CGCGGCGGCT CAAGGCCGAG
GCGGGCTACC CGGGGGGCGT CGCGGTCCGG GTGCACAAGC GCCTGCCCCT CGGCGGGGGA
CTGGGCGGCG GCAGTTCCGA TGCGGCCACC ACCCTGGTGG CCCTGAACCA CCTCTGGGGC
CTGGCCCTGT CCTGCGATCG CCTGGCGGCC CTGGGCCTGG AACTGGGGGC CGACGTGCCG
GTGTTCGTGC GCGGCCGCGC GGCCTGGGCC GAGGGCGTGG GGGAGCGCCT GGAACCGGTC
AGCCTGCCGG AACCCTGGTT CCTGGTGATC CACCCCGGTG TTTCCATCAG CACGGCAGCC
CTGTTCGGCG ACCCGCAATT GACACGAAAC TGCCCGCCAA TCACAATACC CGACTTTATT
TCCGGCAAGG GTGGCAACGT TTTCGAGCCG CTGGTCCGGG CGCGGTACCC CCAGGTGGCG
CGGGCGCTGG ACTGGCTCGC ACAGGCCGCG GGCGAGGCCC GTCTGACCGG TACCGGTGCC
TGCGTGTTCG CCGCCCTGAA GGATCAGGCC GGGGCCGAGG CCCTGCTGGA CCGCCTGCCG
GAAGGCTGGA AGGGCTTCGT CGCCCGGGGA CTCAACCGAT CGCCGCTGCT GGATCGCCTC
GCCCAGGGCT GA
|
|---|
| Protein sequence | MTRWSTNWPA PAKLNLFLHI TGRRGDGYHL LQTVFQPLSV GDSLDFLCLD EDAVRLETPL
PGVAPEQDLV VRAARRLKAE AGYPGGVAVR VHKRLPLGGG LGGGSSDAAT TLVALNHLWG
LALSCDRLAA LGLELGADVP VFVRGRAAWA EGVGERLEPV SLPEPWFLVI HPGVSISTAA
LFGDPQLTRN CPPITIPDFI SGKGGNVFEP LVRARYPQVA RALDWLAQAA GEARLTGTGA
CVFAALKDQA GAEALLDRLP EGWKGFVARG LNRSPLLDRL AQG
|
|---|
| |