Gene Tgr7_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0483 
Symbol 
ID7317667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp514095 
End bp515417 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content70% 
IMG OID643615366 
Producttype I secretion outer membrane protein, TolC 
Protein accessionYP_002512567 
Protein GI220933668 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC GACTGCATCG CATCCTCCTG TCCCTGACCC TGGGCGCCGT GCTCCTGCTG 
CCCACCAGCC AGGCGGCGGA CCTCTGGACC ATCTACCAGA CGGCCCTGCA GCACGATGCC
GAACTGCGCG CCGCAGAGGC CGACTACCGG GCCGCTCTGG AGGCCCGCCC CCAGGCCCGC
TCCGTGCTGC TGCCCCAGAT CGATGCCGGT GCCACCCAGG CGCACACCCG CAGTGAACCG
TCCCCCGGCT CCAGTTTCAG CTACGACACC ACCCGCTTCG ACATCACCCT GAACCAGAGC
GTCTACGACC ACCGCAACTA CGTGGCCCTG CGCCAGGCGG ACCTGGGCAT CGCCCAGGCC
ACAGCGTTCC GCGACGCCGC CCGCCAGGCC CTGATCCTGC GCGTGGCCGA GTCCTACTTC
GGCGTGCTCA CTGCCCAGGA CACCCTGTCC TTCGCCGAGG CCGAGAAGGA GGCCATCGGC
CGGCAGCTGG AACAGGCGGA GCGGCGTTTC GAGGTGGGGC TGATCGCGAT CACCGACGTG
AAGGAATCCC AGGCCCAGTT CGACATCGCC GTGGCCCAGG AGATCGCCGC CCGCAACCAG
CTGGACATCG CCCGGGAACA GCTGGCAGTG GTCACCGGCC AGTACTACGA GGCCCTGGCC
AGTCTGAGCG ACCGCCTGCC CCTGACCACG CCGGAACCCG CCGACATGAG CCGCTGGGTG
GAGAGCGCCA TCGACCGCAA CCTGGGCCTG ACCGCCCGGC GCTTCGCCAC CGAGGCCGCC
GCCGAGGAGA TCAAGCGCCA ACGCGCCGGC CACTACCCCA CCGTGGGCCT GCAGGCCAGC
TACGCGGACA TCGACAACAG CGGCGCCCCG ACGGCCAACT CCCAGCTCCT GGACCGCACC
GACGCCCAGA TCGCCCTGCA GCTGCGCGTG CCCATCTACA GTGGCGGGCG CACCTCCTCG
CTCACCCGCG AGTCCCGGGA ACGCTTCGAC AGCGCCCGTG AACAGCTGGA ACTGACCCAG
CGCCTGACCG TGCAGCAGAC CCGCAGTGCC TACCTGTCCG TAGTCGCCGG GATCTCCCGG
GTGCAGGCCC TGAACCAGGC CCTGGCCTCC ACCCAGGCCG CCGCCGAGGC CGCTGAGGCG
GGCTTCGAGG TGGGCACCCG CACCGCCGTG GACGTGCTGC TGGCCCTGCG CGAGGTGTTT
CGCGCCCAGC GGGACTACGC CCAGGCCCGC TATGAATTCG TGGTCAACAC CCTGCGCCTG
AAGCAGGCCG CCGGCACCCT GGACGAGCAG GACATTCAGG CCATCAACGC CTGGCTGGAG
TGA
 
Protein sequence
MTTRLHRILL SLTLGAVLLL PTSQAADLWT IYQTALQHDA ELRAAEADYR AALEARPQAR 
SVLLPQIDAG ATQAHTRSEP SPGSSFSYDT TRFDITLNQS VYDHRNYVAL RQADLGIAQA
TAFRDAARQA LILRVAESYF GVLTAQDTLS FAEAEKEAIG RQLEQAERRF EVGLIAITDV
KESQAQFDIA VAQEIAARNQ LDIAREQLAV VTGQYYEALA SLSDRLPLTT PEPADMSRWV
ESAIDRNLGL TARRFATEAA AEEIKRQRAG HYPTVGLQAS YADIDNSGAP TANSQLLDRT
DAQIALQLRV PIYSGGRTSS LTRESRERFD SAREQLELTQ RLTVQQTRSA YLSVVAGISR
VQALNQALAS TQAAAEAAEA GFEVGTRTAV DVLLALREVF RAQRDYAQAR YEFVVNTLRL
KQAAGTLDEQ DIQAINAWLE