Gene Tgr7_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0480 
Symbol 
ID7317664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp511012 
End bp511965 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content64% 
IMG OID643615363 
Productlipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 
Protein accessionYP_002512564 
Protein GI220933665 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.182596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCA ACCGACGACA TGAATCCCCG CTTCGCCCCC GCTACTGGCC TTACTGGCTG 
GCGGTCGGAC TCCTGTGGGT CCTGTCGAAA CTCCCCATGG GACTGCAACG CTGGATGGGC 
TATCGCATTG GCGACCTGTT CCACGCCTTC GGCAGGCGTC GGCGTCACAT CGCCCGGGTC 
AACGTGGACC TGTGCTTCCC GGACTGGAGC GAGTCCGAAA GGGCGCGTCT GGTACGCGAA 
CACTTCCGCG CCGTGGGGTT CGCCCTGTTC GAGACCACCC TCTCCTGGTG GGCCAGCGAT 
GCGCGTCTGC GCAAGCTGGT ACGCCTCGAG GGTCTGGAGC ACCTCGAACA GGCCCTCGCC 
AGGGGCAAGG GCGTGCTGCT GCTCAGTGCC CACTTCACCA CCCTGGAGCT GGCCGGCCGC 
CTTTTGACCC AGCATCACCG GTTTGCCGCG ATGTACCGCC CCCACGAGAA CCCGGTCATC 
GAGAAACTGT TCGCAAGCAA TCGCAACCGG CACTGCCTGC AGGCCATTCA GCGCAACGAC 
GTGAAAGGAC TGTTGCGCGC ACTCAAGCAA AACCAGGCGG TCTGGTACGC CCCGGACCAG 
GGCAAGGGCG GCAGAAACAG CGTGATCGCC CCATTCTTCG GTGAGCCCGC CTCAACGCAC 
ACCGGTACGC ATCGCATTGC CCGGGTGAGC GGAGCCCCCG TGGTCCCATT TTTTGGTTTT 
CGTGAGCCGG ACGGGACTTA CCGCCTCGTG ATCGAGCCGC CGCTGGAGAA CTTCCCCACC 
GATGACGTCC TGGCCGATAC GACGCAAATC AACCGGGTCA TCGAGGCCGC CGTGCGCAAG 
GCCCCGGACC AGTACTTCTG GGCCCATCGG CGCTTCAAGA AGCGCAAAGG CATGCCAGAT 
CCCTACTTGG CCCCGCCCTC CCACCGGCGA AAAACCGAGA CATCAGAAAA ATGA
 
Protein sequence
MARNRRHESP LRPRYWPYWL AVGLLWVLSK LPMGLQRWMG YRIGDLFHAF GRRRRHIARV 
NVDLCFPDWS ESERARLVRE HFRAVGFALF ETTLSWWASD ARLRKLVRLE GLEHLEQALA 
RGKGVLLLSA HFTTLELAGR LLTQHHRFAA MYRPHENPVI EKLFASNRNR HCLQAIQRND 
VKGLLRALKQ NQAVWYAPDQ GKGGRNSVIA PFFGEPASTH TGTHRIARVS GAPVVPFFGF 
REPDGTYRLV IEPPLENFPT DDVLADTTQI NRVIEAAVRK APDQYFWAHR RFKKRKGMPD 
PYLAPPSHRR KTETSEK