Gene Tgr7_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0472 
Symbol 
ID7317656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp502959 
End bp503471 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content50% 
IMG OID643615355 
Productlipoprotein signal peptidase 
Protein accessionYP_002512556 
Protein GI220933657 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATTA TTGGCAAAAA GCTCTCGCCG TATGCCCTAT TGTCCATATC GGGCCTGCTG 
GCAGCGTCTG ATCAGGCTGT AAAGTGGCTG GTGCAGCAAT CAATGGCCTA TGGCGAGTAT 
GTTTCGGTGA CCCCGTTCTT TAACTGGGTG CACCTATGGA ACACCGGTGC CGCATTCAGT 
CTTTTTGCGA ATGGTGGAGG CTGGCAGCGC TACTTTTTTA TCGGAATCGC GGTAGTGGTC 
TCGATTTTTC TGATCAAGCT GATCCTTGAA AATCGTCATA AAGGAGAAGC CATCGCTTAC 
AGTCTTATCC TCGGTGGCGC CATGGGCAAC CTGATTGACC GGGTCTTTCG CGGCTATGTT 
GTGGATTCCT TTGATTTCTA TTGGCGAGAC TGGCATTGGC CGGCCTTCAA CCTGGCTGAT 
ATTGCAATTG TCCTCGGTGC CTTACTTTTC GTTTCCAGCA GCTTGTTGGG TAAAAAAGCA 
AACACCAATG CCGAGCCGGA TGGATCTGAC TGA
 
Protein sequence
MLIIGKKLSP YALLSISGLL AASDQAVKWL VQQSMAYGEY VSVTPFFNWV HLWNTGAAFS 
LFANGGGWQR YFFIGIAVVV SIFLIKLILE NRHKGEAIAY SLILGGAMGN LIDRVFRGYV 
VDSFDFYWRD WHWPAFNLAD IAIVLGALLF VSSSLLGKKA NTNAEPDGSD