Gene Tgr7_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0398 
Symbol 
ID7316537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp437738 
End bp438148 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content67% 
IMG OID643615282 
ProductDNA uptake protein and related DNA-binding protein-like protein 
Protein accessionYP_002512483 
Protein GI220933584 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0049521 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAGT ACCTGGTCAA GACCCCGCTA AGACACAACG GTGTGCTATA CCGCCCGGAT 
CCCGCGAACG AGGTCCTCGT GGCCCTGGAC GAAAAGCATG CCGCCCCCCT CCTGGCGCTG 
AGTGCCATCG CGCCCCTGCA TAACACCGCG ACGATGACCA GGCCGGCGGG AGGTCAGGAT 
GACAGCACGA ACACAGGCGA GGGATCGCCC CCGCAGGGCG CCGTGAACAT CAACACCGCC 
ACCCCCGAAG AGTTGGCCTC CGCGATCTCC GGTGTGGGCG ATGGCGTGGC TGCCCGGATC 
GTGGCCTATC GCGAGGAGCA CGGGCCCTTC GAAAGCGTGG ATCATCTCAC CCGCGTGCAG 
GGCATCGGCA AGGCCACCCT GGCGGCCCAC AAGGACGGGC TGACCGTCTG A
 
Protein sequence
MREYLVKTPL RHNGVLYRPD PANEVLVALD EKHAAPLLAL SAIAPLHNTA TMTRPAGGQD 
DSTNTGEGSP PQGAVNINTA TPEELASAIS GVGDGVAARI VAYREEHGPF ESVDHLTRVQ 
GIGKATLAAH KDGLTV