Gene Tgr7_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0329 
Symbol 
ID7316305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp369190 
End bp370371 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content72% 
IMG OID643615213 
Productprotein of unknown function DUF185 
Protein accessionYP_002512414 
Protein GI220933515 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGATT TAAGCCACCT GCCCGAACCC GACGAGGCCG CCCGCCAGGC CAGTGAGGCG 
CTGACGGCGC GGTTGCGCGA CGAGATCGAG GCCGCCGGCG GTTTCCTGCC CTTTCGCCGC
TACATGGAGC TGGCCCTGTA CGCGCCGGGG CTCGGCTACT ACGCCGCCGG CAGCCACAAG
CTGGGCGCCG GCGGCGACTT CACCACCGCG CCGGAGACCT CGCCCCTGTT CGCCCGCTGC
CTGGCCCGGC AGGTGGCCCA GGTGCTGGAG GAACTGGGCG GCGGCCAGGT GCTGGAGTTC
GGCGCCGGCA CCGGCGCCCT GGCGGTGGAG ATGCTGCGGG CCCTGGCGGC CCTGGATCGT
CTGCCGGAGC AATACCTGAT CCTGGAGCTC AGCCCGGACC TGCGCGAGCG CCAGCAGGCC
GCCGTGGCCG ATCTGCCCGA GGCGCTCGCG GCCCGGGTGT GCTGGCTGGA TGCCCTGCCG
CCGAGGGGTT TCCGGGGCGT GATGCTGGGC AACGAGGTGC TGGACGCCAT GCCCGTGGAG
GTGTTCACCT GGACCGGCGA GAGCGTGCTG CAAAGGGGCG TGGCCTGGGA GGGCGGACGG
TTCGTCTGGG CGGAGCGCCC CGCGGAGCCC GGGCTGGGCG CCGCCGTGCA GCGCCTGCAG
GCCGAGACCG GCAGCGCCTG GCCGCCGGGA TACACCTCGG AATACAGCCC GGGTCTCGCG
CCCTGGGTGG CCTCGCTCGC CGAAGTCCTG GCCGCGGGGC TGATCCTGCT CATCGATTAC
GGTTATCCCC GTGCCGAGTA CTACAGTCCC GAGCGCAGCC GGGGAACGCT CATGGGCTAC
TACCGGCACC GGGCCCTGGA CGATCCTTTC TTCCTGCCGG GGCTCGCGGA CCTCACCGCC
CACGTGGATT TCACCGCCGT GGCCGAGGCG GGCGTGGGCG CCGGTCTGGA CGTGCTGGGC
TACACCACCC AGGCCTGGTT CCTGATCGGC GCGGGACTGG ACCAGGTGTT CCAGGAAGCC
GCCAGTGAAG ATCCCCGGGA ACAACTGGCG CTTGCCGGCC AGGTGCGCCA GCTCACCCTG
CCCGGGGAGA TGGGCGAGCG CTTCCAGGTG ATCGGCCTGG GGCGGGGCAT CGAGGGGCCG
TTGGTGGGCT TCGCGGGACG GGATCTGAGG GGCAGGCTCT GA
 
Protein sequence
MPDLSHLPEP DEAARQASEA LTARLRDEIE AAGGFLPFRR YMELALYAPG LGYYAAGSHK 
LGAGGDFTTA PETSPLFARC LARQVAQVLE ELGGGQVLEF GAGTGALAVE MLRALAALDR
LPEQYLILEL SPDLRERQQA AVADLPEALA ARVCWLDALP PRGFRGVMLG NEVLDAMPVE
VFTWTGESVL QRGVAWEGGR FVWAERPAEP GLGAAVQRLQ AETGSAWPPG YTSEYSPGLA
PWVASLAEVL AAGLILLIDY GYPRAEYYSP ERSRGTLMGY YRHRALDDPF FLPGLADLTA
HVDFTAVAEA GVGAGLDVLG YTTQAWFLIG AGLDQVFQEA ASEDPREQLA LAGQVRQLTL
PGEMGERFQV IGLGRGIEGP LVGFAGRDLR GRL