| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0212 |
|---|
| Symbol | |
|---|
| ID | 7316790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 232293 |
|---|
| End bp | 233057 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643615097 |
|---|
| Product | putative transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_002512298 |
|---|
| Protein GI | 220933399 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACGT CCAATATCAT CGATCTGCAT GGCCTGAAAA AGGCCTGCAG CAACTGCAGC
CTCCACGACC TGTGCATCCC CATGGGGGTC AGTGACCAGG AACTGGACGC GCTGGAGCGC
ATCATCAACC GCCGCCGGCC TCTGCAGCGG GGCGAGTACC TGTACCGCCC CGGCGACCGC
ATGCAGGCCC TGTACGCGGT GCGTGCCGGC TCCGTGAAGA CCTCCTCCAT CAGCGACGAC
GGCCTGGAAC AGGTCACCGG CTTCCACCTG CCCGGCGAAC TCCTGGGTCT GGATGCCATC
AGCGACGGCA TCCACCCCTG CACCGCCCGG GCCCTGGAAA CCACCTCCGT GTGCGAGATC
CCCTACGACA GGCTCGAGGA CCTGGCCGGC CAGGTGCCAG GCCTGCAACG TCAGTTGTTC
CGCATCATGA GCCGGGAGAT CCAGTTCGAC GAACACCTGA TGACCCTCCT GGGCAAGAAG
TCCTCGGAGG CGCGCCTGGC CGCCTTCCTG CTGAGCCTGT CCAAGCGCTT CGGCGAACGG
GGCTTCTCCC GCCAGGAATT CAACCTGACC ATGTCCCGCA ACGACATCGC CAACTACCTG
GGCCTGGCGG TGGAGACGGT CAGCCGGCTG TTCACCCGCT TCCAGCAGCT CGGCCTGCTG
GAGGTCAACC GCAAGCTGGT GCAGCTGATC GACATGGAAG GCATGCACCA GATGGCCGGC
GCCCACGGCC CTGAAACCCT TGAAAAAGGC GGCCGGGGAG GCTGA
|
|---|
| Protein sequence | MPTSNIIDLH GLKKACSNCS LHDLCIPMGV SDQELDALER IINRRRPLQR GEYLYRPGDR
MQALYAVRAG SVKTSSISDD GLEQVTGFHL PGELLGLDAI SDGIHPCTAR ALETTSVCEI
PYDRLEDLAG QVPGLQRQLF RIMSREIQFD EHLMTLLGKK SSEARLAAFL LSLSKRFGER
GFSRQEFNLT MSRNDIANYL GLAVETVSRL FTRFQQLGLL EVNRKLVQLI DMEGMHQMAG
AHGPETLEKG GRGG
|
|---|
| |