Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0195 |
Symbol | |
ID | 7316773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 214115 |
End bp | 214651 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643615080 |
Product | peptide deformylase |
Protein accession | YP_002512281 |
Protein GI | 220933382 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAAGC TTGAGATCCT GCATTTTCCC GACCCCCGCC TGCGCAAGCG CGCCGTGCCG GTGGACAAGG TCGACGACGA GATTCGCCGC CTGGTGGACG ACATGTTCGA GACCATGTAC GACGCCCCCG GCATCGGCCT GGCCGCCACC CAGGTCAATG TCCAGCGCCA GGTGATCGTC ATCGACGTCT CCGAGAACAA CGACCAGCCC CTGGTGTTCA TCAACCCGGA GATCCTGGAT CGCGTGGGTG AGGAGGAGAT GCAGGAAGGC TGCCTGTCGG TGCCCGGTTA TTTCGAGACC GTGCGCCGCG CCGACCGGGT GCGGGTGCGC GCCCTGGACC GCAACGGTGA GCCCTTCGAA CTGGAGACCG ACGGCCTGCT GGCGGTGTGC ATCCAGCACG AAATGGATCA CCTGGACGGC AAGCTGTTCG TGGACTACCT CTCGCCGCTC AAACGCAACC GCATCCAGAA AAAACTCGAA AAGCTCACCC GCCAGGGCGC CCTGCCGAAA AACATCGACC GGCAGCATGC CATTTGA
|
Protein sequence | MAKLEILHFP DPRLRKRAVP VDKVDDEIRR LVDDMFETMY DAPGIGLAAT QVNVQRQVIV IDVSENNDQP LVFINPEILD RVGEEEMQEG CLSVPGYFET VRRADRVRVR ALDRNGEPFE LETDGLLAVC IQHEMDHLDG KLFVDYLSPL KRNRIQKKLE KLTRQGALPK NIDRQHAI
|
| |