| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0194 |
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| Symbol | |
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| ID | 7316772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 212782 |
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| End bp | 213933 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643615079 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_002512280 |
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| Protein GI | 220933381 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCA TCCATCCGAC TCGCACCGGA CAGATCCTGT CCGCCACGGC CCTTATTGTA
GCGTTACTGG CCGGCGGATG CGCCAGCACC GAGCCCGCCC CCGCGCCAGC ACCCCAGCCC
ACCCCGGCAC CCGCACCCGT CGCCACACCG GCGCCCCCGC CGCCCGCACC GGCCCCGGTC
CAGGTACGCG AGGCCGCGCC CGAGCGCTAC GTGGTGCAGC GGGGCGACAC CCTCTGGGAC
ATCGCCAACA CCTTCCTGCG CGACCCCTGG TACTGGCCCG AGATCTGGGT GGTGAACCCC
CAGATCCCCA ACCCCCACCT GATCTACCCC GGTGACGTGA TCACCCTTTA CTACATCGAC
GGCCAGCCGC GCCTGATGGT CGACGGCGGC CCGCGGGTAC GCCCGACCCA GCGCCTCTCG
CCCCAGGTCC GGGTGGAGGA GCTGCCGCCC TCCCTGGACG TGCCCATCCA GAGCCTGCAC
CAGTTCCTGG TGCGCCCGCG GGTGGTGACC GAGGAACAGC TGGACCAGGC CGCCTACGTG
CTGGCCTCCC AGGACGACCG CATGATCTTC GGCACCAACG ACCGACTGTA CGTGCGCGGC
CTGGACGCCG ATGCCCTGGA GGGCAGCCGC TACAGCATGT TCCGCAAGGG TGGCGCCCTG
AACGATCCGG TCAGCGGCGA ACTGCTGGGC TTCGAGGCCA TCCCCGTGGG CGACGCAGAA
GTGGTGCGCG CCGGCGACCC GGCCACCGTG GTGATCAGCC GCAGTGACCG CGAGGCCCTC
ATCGGCGACC GCCTGATGCC CCTGGACAAC AGCGACCAGG ACTTCGTGTT CACCCCACAC
GCGCCCCCGA TGGACACGGA CGGCAAGGTG ATCTCCCTGT TCGACGCCAT CAGCCAGATC
GCCCGCTTCC AGGTGGCTGT CATCAACCTG GGCGAGCGCA ACGGCATCGA GCAGGGCCAC
GTGCTGGCCA CCTACCAGTC CGGCCGCGTG ATCCGGGACA CCATCGCCAG CGAACGCGGC
GAAGAGGTGA CCCTGCCGGA CGAGCGCATC GGCCTGATGA TGGTGTTCCG CACCTTCGAG
AAGGTCAGCT ACGCCCTGGT GATGGAGTCC ACCCGTCCCA TCCAGGAAGG CTACAGCGTA
CGTCACCCCT GA
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| Protein sequence | MSAIHPTRTG QILSATALIV ALLAGGCAST EPAPAPAPQP TPAPAPVATP APPPPAPAPV
QVREAAPERY VVQRGDTLWD IANTFLRDPW YWPEIWVVNP QIPNPHLIYP GDVITLYYID
GQPRLMVDGG PRVRPTQRLS PQVRVEELPP SLDVPIQSLH QFLVRPRVVT EEQLDQAAYV
LASQDDRMIF GTNDRLYVRG LDADALEGSR YSMFRKGGAL NDPVSGELLG FEAIPVGDAE
VVRAGDPATV VISRSDREAL IGDRLMPLDN SDQDFVFTPH APPMDTDGKV ISLFDAISQI
ARFQVAVINL GERNGIEQGH VLATYQSGRV IRDTIASERG EEVTLPDERI GLMMVFRTFE
KVSYALVMES TRPIQEGYSV RHP
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