| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0180 |
|---|
| Symbol | |
|---|
| ID | 7316757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 197695 |
|---|
| End bp | 198984 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643615065 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_002512266 |
|---|
| Protein GI | 220933367 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACC CTATCCGAGT CAACTTTGAA CGCCTGCGCG AGGACGTGCT GGCCCTGTCG
CGCATCGGCC AGACCCCCGA CCAGGGCATC CACCGGATGG CCTTCAGCGA GGGCGATCTG
GAGGGCCGTC GCTGGTTCCG GTCGCGCATC GAGGCGGCGG GGCTGGAGGT CTACGAGGAC
GGCGCCGCCA ACCTGCACGC GCGTCTGGAC TGGGACGACA AGCGCCCCAG CGTGATGATG
GGCTCGCACC TGGACACGGT GCCCGGCGGC GGCCCCCTGG ACGGGGCGCT CGGCGTGCTG
GTGGGGCTCG AGGTGCTGCG CACCGTCAAG GAGGCGGGCG TTGCGCTCAA GCATCCCCTG
GAGGCGGTGG ACTTCACCGA CGAGGAGGGG CGCTTCGGCG GCCTGTTCGG CTCCCAGGCC
ATCGCCGGGC AGCTGACGCC GGCGGTGATC CACAACGCCC GGGACCTGGA TGGCGTGACG
CTGACCGAGG CCATGGCCTC CTGGGGGCTG GACGCCAACG CCGCCCTGTT CGCCCGGCGT
GCGCCGGATT CCATCCACGC CTACCTGGAG CTGCACATCG AGCAGGGCCC GGTGCTGGAC
CGCAACCAGG TGTCCATCGG CGTGGTGGAC GCCATCACCG GCCTGTTCAA GTGGGACGTG
CGCCTCATGG GCCAGACCAA CCACGCGGGC ACCACCCCCA TGGACATGCG CGTGGACAGC
TTCCAGGGCC TGGCGGAATT CGCCGGCGAG ATCAACCGCA TCCTGGAGGA GCACGGCAGC
CCCCACAGCC GCGCCACCAT CGGCCGGGTG GAGCTCAAGC CCGGCGCCGC CAACACCGTG
CCGGGGCAGA CCAGCTTCTC CCTGGACGTG CGTGACACCG ATGCCGAGAC CCTCAGGAAC
CTGGCGGATG CCTTCCGCCG GACCCTCTCG GCCCTGGCCC GTCGCCGGGA CCTGATGTTC
GAGTTCGACG TGCTCTCGGA GATCCCGCCC ATGCGCTGCG ATCCCGGCCT GGTGCAGCTG
GTGACCGACA CCGCCGAACG TCTCGAACTC AAGCACCTGC GCATGCCGAG CGGCGCCGCC
CACGACGCCC AGATCATGGG CTCGGTGACC CGCACCGGCA TGATCTTCGT GCCGAGCCTG
GAGGGCAAAA GCCACTCGGC CTCCGAGTGG ACCGCCTGGG AGGACATCGA GCGGGGCGCG
AACCTGGCCT TGCACACGGT GTTGCAGCTG GCCGCCGCGG ATGCCGGCGC GGCCATCAGA
GAACAAAAAC CGAAGAGGAA GCAGGCATGA
|
|---|
| Protein sequence | MNHPIRVNFE RLREDVLALS RIGQTPDQGI HRMAFSEGDL EGRRWFRSRI EAAGLEVYED
GAANLHARLD WDDKRPSVMM GSHLDTVPGG GPLDGALGVL VGLEVLRTVK EAGVALKHPL
EAVDFTDEEG RFGGLFGSQA IAGQLTPAVI HNARDLDGVT LTEAMASWGL DANAALFARR
APDSIHAYLE LHIEQGPVLD RNQVSIGVVD AITGLFKWDV RLMGQTNHAG TTPMDMRVDS
FQGLAEFAGE INRILEEHGS PHSRATIGRV ELKPGAANTV PGQTSFSLDV RDTDAETLRN
LADAFRRTLS ALARRRDLMF EFDVLSEIPP MRCDPGLVQL VTDTAERLEL KHLRMPSGAA
HDAQIMGSVT RTGMIFVPSL EGKSHSASEW TAWEDIERGA NLALHTVLQL AAADAGAAIR
EQKPKRKQA
|
|---|
| |