| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0174 |
|---|
| Symbol | |
|---|
| ID | 7316751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 188960 |
|---|
| End bp | 190513 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643615059 |
|---|
| Product | SpoVR family protein |
|---|
| Protein accession | YP_002512260 |
|---|
| Protein GI | 220933361 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2719] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00467153 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACC GCTTCGAAGC CGACGCCCGC CTGCTCTACA CCGGACCGGA CTGGGACTAC
CGGCTGGTGA AGAAGGCCTA TGACGCCATC GAGCGCATCG CCGTGGACGA GATGGGTCTC
GACCCCTATC CCAGCCAGAT CGAGGTGATC AGCTCCGAGC AGATGCTCGA CGCCTATGCC
TCCATGGGCA TGCCCCTGTT CTACCGGCAC TGGTCCTTCG GCAAGCACTT CGCCCGGGAC
GAGATGCTCT ACCGCAAGGG CATGACCGGG CTCGCCTACG AGATCGTGAT CAACTCCAAC
CCCTGCCTGT GCTACATCAT GGAAGAGAAC ACCATGACCA TGCAGACCCT GGTCATGGCC
CACGCCGCCT TCGGCCACAG CCACTTCTTC AAGAACAACC AGCTGTTCAA GGCCTGGACC
GACGCGGACT CCATCCTGGA CTACCTGGAC TTCGCCAAAC GCTACGTGGC CGAGTGCGAG
GAGCGCTACG GCGCCGAGGC CGTGGAGCAG GTGCTGGACG CCGCCCATGC CCTGATGAGC
CACGGGGTGC ACCGCTACCC CCGCAGGACC CTCAACCTGA AGCGCGAGAT GGAACGGGAG
CGGGAGCGGC GCCGCCACGA GGAACAGACC TTCAGCGATC TCTGGCGCAC CCTGCCCCGG
CGCAAACCCG AGGACGGCGA CGAGGACCCG GGACTGGACG CACGCCGGCG CGCCCTGGGC
CTGCCCGAGG AGAACCTGCT GTATTTCCTG GAGAAGCGGG CGCCCAAGCT GGCCCACTGG
CAGCGCGAGC TGTTGCGCAT CGTGCGCATG GTGGCCCAGT ACTTCTATCC CCAGCGCCAA
ACCAAGGTGA TGAACGAGGG CTGCGCCACC ACGGTGCACT ACGCCATCAT GAACCGCCTG
CACGAGACCG GGCAGATCAC TGACGGCGCC TTCATGGAGT TCCTGCACGC CCACACCAAC
GTGGTGTTCC AGCCCGAGTT CGACGACCGG CGCTTCTCGG GCATCAACCC CTATGCCCTG
GGTTTCGGCA TCCTCCAGGA CATGAAGCGC ATGGGCGAAA ACCCCACCGA GGAGGACCGG
CGCTGGTTCC CGGACATCGC CGGCAACCCG GACTATCTCG GCACCTGGAA GTCCGCCTGG
GCCGAGTACC GGGACGAGAG CTTCATCCTG CAGTTCCTGA GCCCGCGCCT GATGCGCGAG
TGGCGCCTGT TCTCGGTGAC CGACGATGCC GACGAGGCGG ACCTCAAGGT CGAGGCCATC
CACAACGAGG CCGGCTACCG GGAGGTGCGC CGGGCGCTGG CCGCCCAGTA CGACCTGGCC
CGCCACGAAC CGGACATCCA GGTGGTGGAC GTGGACCTGA CCGGCGACCG GCGCCTGATC
CTGGAACACC GGGTGCTGGA CGGACGCCTG CTGGAAGAGC GCAACACGCT CATGGTCCTG
CGCCACCTGG CCAACCTGTG GGGCTACCCG GTGAGCCTGG TGGAGATCGA CCCCCGGGAC
GAGGACATCC TCAACGCCTA CGAGGACGTG GAGCCGGATC GGCGGATGGA TTGA
|
|---|
| Protein sequence | MINRFEADAR LLYTGPDWDY RLVKKAYDAI ERIAVDEMGL DPYPSQIEVI SSEQMLDAYA
SMGMPLFYRH WSFGKHFARD EMLYRKGMTG LAYEIVINSN PCLCYIMEEN TMTMQTLVMA
HAAFGHSHFF KNNQLFKAWT DADSILDYLD FAKRYVAECE ERYGAEAVEQ VLDAAHALMS
HGVHRYPRRT LNLKREMERE RERRRHEEQT FSDLWRTLPR RKPEDGDEDP GLDARRRALG
LPEENLLYFL EKRAPKLAHW QRELLRIVRM VAQYFYPQRQ TKVMNEGCAT TVHYAIMNRL
HETGQITDGA FMEFLHAHTN VVFQPEFDDR RFSGINPYAL GFGILQDMKR MGENPTEEDR
RWFPDIAGNP DYLGTWKSAW AEYRDESFIL QFLSPRLMRE WRLFSVTDDA DEADLKVEAI
HNEAGYREVR RALAAQYDLA RHEPDIQVVD VDLTGDRRLI LEHRVLDGRL LEERNTLMVL
RHLANLWGYP VSLVEIDPRD EDILNAYEDV EPDRRMD
|
|---|
| |