| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0172 |
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| Symbol | |
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| ID | 7316749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 187422 |
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| End bp | 187625 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643615057 |
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| Product | cold-shock DNA-binding domain protein |
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| Protein accession | YP_002512258 |
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| Protein GI | 220933359 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000163048 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTG GTACTGTGAA GTGGTTCAAC GAATCCAAGG GTTTTGGTTT CATTACTCCT
GATGACGGTG GCAAGGACGT ATTCGTCCAC TTCAGCGCCA TCAGCGGCTC AGGGTTCAAG
ACCCTGGCCG AAAACCAGAA GGTCTCTTTC GATGTGCAGG ATGGCCCCAA GGGCCCGCAG
GCGGCGAACG TCGTCGCACA GTAA
|
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| Protein sequence | MATGTVKWFN ESKGFGFITP DDGGKDVFVH FSAISGSGFK TLAENQKVSF DVQDGPKGPQ
AANVVAQ
|
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