Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0164 |
Symbol | |
ID | 7316741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 179474 |
End bp | 180007 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643615049 |
Product | 17 kDa surface antigen |
Protein accession | YP_002512250 |
Protein GI | 220933351 |
COG category | [S] Function unknown |
COG ID | [COG3134] Predicted outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.201617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCC GATATGCAGC GATTCCCCTG GCCCTGGCCG CGCTGACCAC CGGCGCGGCC CAGGCCTTCG ACCGCCCCGG CGGCGTGTTC TACGACCAGG CCCGGGTGGT GGACGTGCGC CCGGTGAAGG AGCTGGTGCG GGTGGCCGCG CCCGCCCAGG AATGCTGGAC CCAGCCGGTA CGCCACGTGC AGCAGACCGG TCCGAGCACC GGTGCCTATA CCCTGTCCGG CGCCATGATC GGCGGCGTGC TGGGCAACCA GATCGGCAAG GGCGACAGCC GCAATGCGGC CACCGTGGTG GGGGGCGTGG CCGGTGCCGT GATCGGCAAC AGCATGGCCC AGAGCCGCCA GCAGACCCGG GTCTACACCA CCCAGGAGCA GCAGTGCCAG ACCGTGGAGC GCTTCTACGA GGAAGAGCGC CACGTGGGCT ACCGGGTCAC CTATCGCTAC CAGGGCCAGG AGTACACCCG CACCATGCCC TACGATCCGG GCCGGACGGT GCGCGTGCGC GTGAGCGTCG ATCCCATCGA CTGA
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Protein sequence | MKTRYAAIPL ALAALTTGAA QAFDRPGGVF YDQARVVDVR PVKELVRVAA PAQECWTQPV RHVQQTGPST GAYTLSGAMI GGVLGNQIGK GDSRNAATVV GGVAGAVIGN SMAQSRQQTR VYTTQEQQCQ TVERFYEEER HVGYRVTYRY QGQEYTRTMP YDPGRTVRVR VSVDPID
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