Gene Tgr7_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0108 
SymbolpyrE 
ID7316114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp117300 
End bp117941 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID643614997 
Productorotate phosphoribosyltransferase 
Protein accessionYP_002512198 
Protein GI220933299 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0895164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCT ACCAGTCCGA ATTCCTCGCC TTCTGCCTGG AGCGCGGCGT GCTGCGCTTC 
GGTGAATTCA CCCTCAAGTC CGGCCGGATC AGCCCGTATT TCTTCAATGC AGGCCTGTTC 
AACACCGGTT CCGACCTGGC CCGGCTGGGG CGCTTCTACG CCCAGGCCAT CAGCGAATCG 
GGGGCAGCGT TCGACATGCT GTTCGGCCCC GCCTACAAGG GCATCCCGCT GGCCGCCGCC 
ACCGCCATCG CGCTGGCCGA GCACCACGGC CGCGACCTGC CCTGGTGCTT CAATCGCAAG 
GAGGCCAAGG ACCACGGCGA GGGCGGTTCC CTGGTGGGCG CGCCGCTCAC TGGCCGGGTA 
CTGATCGTGG ACGACGTGAT CACCGCCGGC ACCGCCATCC GCGAATCCGT GGACATCATC 
CGTGCCGCCG GCGCCGAGCC CGTGGGCGTG GCCATCGCGC TCAACCGCCA GGAGCGGGGC 
AAGGGTGAAC ACTCAGCCAT CCAGGAAGTG GAGGCGGAAT ACGGCCTCAA GGTGATCAAC 
ATCGCCTCCC TGGGGGATCT CATCGAGTTC ATGCGCGAGC AGGGCGGCCT GGACGAACAC 
CTCAAGGCCG TGGAGGCATA CAGGGCACAG TACGGTGTTT AA
 
Protein sequence
MKTYQSEFLA FCLERGVLRF GEFTLKSGRI SPYFFNAGLF NTGSDLARLG RFYAQAISES 
GAAFDMLFGP AYKGIPLAAA TAIALAEHHG RDLPWCFNRK EAKDHGEGGS LVGAPLTGRV 
LIVDDVITAG TAIRESVDII RAAGAEPVGV AIALNRQERG KGEHSAIQEV EAEYGLKVIN 
IASLGDLIEF MREQGGLDEH LKAVEAYRAQ YGV