| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0087 |
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| Symbol | |
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| ID | 7316093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 91031 |
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| End bp | 93742 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643614977 |
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| Product | DNA polymerase I |
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| Protein accession | YP_002512178 |
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| Protein GI | 220933279 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAAGA CCCCGCCCCT GGTGCTGGTG GATGGATCCT CCTACCTGTA TCGCGCCTTC
CACGCCCTGC CGCCCCTGAC CAATTCCCGG GGTGAACCCA CCGGGGCCGT CTATGGTGTG
GCCAACATGC TGCGCAAGCT GCTCAAGGAC TACGCGCCGG AGCACGTGGT GGTGGTGTTC
GATGCCAAGG GCAAGACCTT CCGGGACGAG ATGTACGCCG AGTACAAGGC CAACCGCCCG
CCCATGCCCG ACGAGCTGGC CGCCCAGGTG GAGCCCCTGC ACCAGGTGGT CCAGGCCATG
GGCCTGCCCA TGCTGGTGGT CCCCGGGGTG GAGGCGGACG ACGTGATCGC GACCCTGGCC
CGCGAGGGCA GGGAACACGG CCTGGAGGTG GTGATCTCAA CCGGCGACAA GGACATGGCC
CAGCTGGTGG AGCCCGGGGT GACCCTGGTG AACACCATGA CCGACACCAA AATGGATGCC
GAGGGGGTCA AGGAGAAGTT CGGCGTTGCG CCGGAGCAGA TCGTGGATTA CCTGGCGCTG
ATCGGCGACA CCGTGGACAA CGTGCCCGGG GTGGACAAGG TGGGGCCCAA GACCGCAGTG
AAGTGGCTGG AGGCCTACGG CAGTCTCGAC GGCATCATGG AACACGCGGA GGAGATCAAG
GGCAAGGTGG GCGAGAACCT GCGCGCGGCC CTGGGCCACC TGCCCCTGTC CCGGGAGCTG
GTGACCGTGC GCCGGGACCT GGAACTGGAC GTGACGCCCG AGTCCCTGCG TCTCGGCGAG
CCGGACCGGG AGACCCTCAG GGCGCTGTTC TCCCGCCTGG AATTCCGCAC CTGGCTCAAG
GAACTGGAGT CGGGCGAAGA GCAAGCCCAG GCCGCATCCG ATGACCCGAC ACCCGGCCAG
CCCGCCCAGG CCTACGAGAC GATCCTGGAC GAAAAGGCCC TGGCCGCCTG GATGAAGCGC
CTGGAGACGG CAGAGCTGTT CGCCTTCGAC ACCGAGACCA CCAGCCTGGA CTACATGCAG
GCGCAAGTGG TGGGGGTCTC CTTCGCCGTG AAGACCGGCG AGGCCGCCTA CCTGCCGCTC
GCCCATGACT ACGCCGATGC GCCCCAGCAA CTGGATCGGG ACGAGACGCT GAAGCGCCTC
AAGCCCCTGC TGGAGAGCGC CAGGCACAAG AAGCTCGGCC ATCACCTCAA ATATGACCGC
AACGTGCTGC TCAACCACGG CATCGAGTTG AACGGCATCG AGCACGACAC CATGCTGGAG
TCCTACGTGT TGAACAGCAC GGCGAGCCGT CACGACATGG ACAGCCTGGC CCAGAAGTAC
CTGGACTACC GCACCACCCA CTACGAGGAA GTGGCCGGCA AGGGGGCCAA GCAGATCCCC
TTCTCCCAGG TGCGCATCGA GGACGCCACC CCCTACGCCG CCGAGGACGC GGACATCACC
CTGCGCCTGC ATGAACACCT CTGGCCGCAG CTCTCGGCCG CCGAGGGCCA GTGCCGGGTG
TACCGGGAGA TCGAGATGCC CCTGGTGCCG GTGCTCTCGC GCATGGAGCG CACCGGGGTG
AAGGTGGACG CCGAGCGCCT GTTCGCCCAG AGCCACGAGC TGGCCGAGCG CATGGGCCAG
ATCGAGCGGG AGGCCCATGA GGTGGCCGGC GGGGCCTTCA ACCTGGGCTC ACCCAAGCAG
ATCCAGGAGA TCCTGTACGA GCGCCAGAAG CTGCCGGTGC TCAGGAAGAC CCCCAAGGGC
CAGCCCTCCA CCGCCGAGGA CGTGCTGGAG CAGCTGGCCC TGGACTATCC GCTGCCGAAG
CTGATCCTGG AGCACCGCTC GCTGTCCAAG CTCAAGTCCA CCTACACCGA CAAGCTGCCG
GAGCGCATCG ACCCGGACAC CGGCCGGGTG CACACCTCCT ATCACCAGGC GGTGGCCTCC
ACCGGGCGCC TGTCCTCCTC GGACCCCAAC CTGCAGAACA TCCCCATCCG CACCGAGGAG
GGCCGGCGCA TCCGCCAGGC CTTCGTGGCC CCTTCGGGCC GGCGGCTGGT AGCGGCGGAC
TACTCCCAGA TCGAGCTGCG CATCATGGCC CACCTGTCCG GGGACGCCGG CCTGCTCAGG
GCCTTCGCCG AGGGTCAGGA CATCCACCGG GCCACCGCCG CCGAGGTCTT CGGCGTGGGC
CTCGACCAGG TCTCCGGCGA GCAGCGCCGG GCCGCCAAGG CCATCAACTT CGGGCTCATC
TACGGCATGT CCGCCTTCGG CCTGGCCCGC CAGCTGGGCA TCGAGCGGGG CGACGCCCAG
GACTACGTGG ACCGCTATTT CGCCCGCTAT CCCGGCGTGA AGGACTACAT GGAATCCACC
CGGGAAAAGG CCCGGGATCT GGGCTACGTG GAGACCCTGT TCGGCCGGCG CCTGTACCTG
CCGGACATCA ATGCCCGCAA CGGCCAGATC CGCGCCCAGG CGGAGCGGGT GGCCATCAAC
GCCCCCATGC AGGGCACCGC CGCGGACATC ATCAAGCGGG CCATGATCCA GGTGGATCAA
TGGATTCGCG AATCACGAAT ACCGGCGGTG ATGATCCTGC AGGTGCACGA CGAACTGGTG
CTGGAGGTGG ACGAGGACGC GGTGGACAAG GTGCGTGAGG AGCTGTGCGT GCGCATGTCC
CAGGCCGCCG AGCTCAAGGT GCCCCTGGTG GTGGAGGCCG GGGTGGGGGA TAACTGGGAT
GATGCACATT AG
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| Protein sequence | MSKTPPLVLV DGSSYLYRAF HALPPLTNSR GEPTGAVYGV ANMLRKLLKD YAPEHVVVVF
DAKGKTFRDE MYAEYKANRP PMPDELAAQV EPLHQVVQAM GLPMLVVPGV EADDVIATLA
REGREHGLEV VISTGDKDMA QLVEPGVTLV NTMTDTKMDA EGVKEKFGVA PEQIVDYLAL
IGDTVDNVPG VDKVGPKTAV KWLEAYGSLD GIMEHAEEIK GKVGENLRAA LGHLPLSREL
VTVRRDLELD VTPESLRLGE PDRETLRALF SRLEFRTWLK ELESGEEQAQ AASDDPTPGQ
PAQAYETILD EKALAAWMKR LETAELFAFD TETTSLDYMQ AQVVGVSFAV KTGEAAYLPL
AHDYADAPQQ LDRDETLKRL KPLLESARHK KLGHHLKYDR NVLLNHGIEL NGIEHDTMLE
SYVLNSTASR HDMDSLAQKY LDYRTTHYEE VAGKGAKQIP FSQVRIEDAT PYAAEDADIT
LRLHEHLWPQ LSAAEGQCRV YREIEMPLVP VLSRMERTGV KVDAERLFAQ SHELAERMGQ
IEREAHEVAG GAFNLGSPKQ IQEILYERQK LPVLRKTPKG QPSTAEDVLE QLALDYPLPK
LILEHRSLSK LKSTYTDKLP ERIDPDTGRV HTSYHQAVAS TGRLSSSDPN LQNIPIRTEE
GRRIRQAFVA PSGRRLVAAD YSQIELRIMA HLSGDAGLLR AFAEGQDIHR ATAAEVFGVG
LDQVSGEQRR AAKAINFGLI YGMSAFGLAR QLGIERGDAQ DYVDRYFARY PGVKDYMEST
REKARDLGYV ETLFGRRLYL PDINARNGQI RAQAERVAIN APMQGTAADI IKRAMIQVDQ
WIRESRIPAV MILQVHDELV LEVDEDAVDK VREELCVRMS QAAELKVPLV VEAGVGDNWD
DAH
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