Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0060 |
Symbol | |
ID | 7316710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 58874 |
End bp | 59497 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643614950 |
Product | Sterol-binding domain protein |
Protein accession | YP_002512151 |
Protein GI | 220933252 |
COG category | [S] Function unknown |
COG ID | [COG3165] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATGA GTGTGTTGGC CGCCTTCAGC GCCGCCCTGG AAAAGGCGCT GAACGGCTAC CTGGAGCTGG ATCCCGACAG CCGCGAGCGG CTCGCGGCCA TGCACGGCGG CGTGGTGGCC CTGAGCTTCA CGCTGCCCGA GGCGACCCTC TACTTCATCC CCGGCGCCGA CCGCCTGCAG GTGAGCACCG CCTGCGACGC CGAGCCGGAC ACCCGCATCA GCGGTTCCCC CATCGCCCTG GGACGGCTGG CCCTGGCCGG TGAGACCACG CGCCTGCCGG AGGGTGTACG CCTGGAGGGC GATGCCCGGC TGGGCCAGCA GTTCCGCGAC CTGCTGCGGG GCGTGGACCT GGACTGGGAG GAGTGGCTGT CCCGGCTGAC CGGCGATCTC GTTGCCCATC GCGTCGGCGA GGCCGTGCGC GGCGTCACCG GCTGGGGAAG GCGCGCCGGC GAGAGCCTGC GCCTGGACCT GGGCGAATAC CTGCGCGAGG AATCCGGCAC CCTGCCCGGC CGTGACGAGG TGGAAGGCTT CATGGACGAC GTGGACCGGA TGCGCGAAGA CGTGGACCGG CTGCAGGCGC GCATTGCCCG TCTGGAACAG ATCCTGCGGG AACACAAGCC GTGA
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Protein sequence | MDMSVLAAFS AALEKALNGY LELDPDSRER LAAMHGGVVA LSFTLPEATL YFIPGADRLQ VSTACDAEPD TRISGSPIAL GRLALAGETT RLPEGVRLEG DARLGQQFRD LLRGVDLDWE EWLSRLTGDL VAHRVGEAVR GVTGWGRRAG ESLRLDLGEY LREESGTLPG RDEVEGFMDD VDRMREDVDR LQARIARLEQ ILREHKP
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