Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0057 |
Symbol | |
ID | 7316707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 56035 |
End bp | 57369 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643614947 |
Product | heat shock protein HslVU, ATPase subunit HslU |
Protein accession | YP_002512148 |
Protein GI | 220933249 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.408482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGACA TGACCCCCCG TGAGATCGTC CAGGAACTGG ACAAGCACAT CGTCGGCCAG AAGGACGCCA AGCGCGCCGT GGCCATTGCC CTGCGCAACC GCTGGCGCCG CCAGCAGCTG CCCGAGGCCC TGCGCCAGGA AGTGACCCCC AAGAACATCC TCATGATCGG CCCCACCGGC GTGGGCAAGA CCGAGATCGC CCGGCGCCTG GCGCGGCTGG CCAATGCCCC TTTCATCAAG GTGGAGGCCA CCAAGTTCAC CGAGGTGGGC TACGTGGGCC GTGACGTGGA ATCCATCATC CGCGATCTGG TCGACGCGGC CATCAAGCTG CTGCGCGAAC AGGAGATGGG CAAGGTGCGC TTCCGTGCCG AGGAGGCCGC CGAGGAGCGC GTCCTGGACG TGCTGCTGCC CGCGCCCCGC CAGGCGGGCT TCATGAGCGA GCCGGCCTCC GCGCCGGAGC AGAGCGAGAC GCGGCAGAAA TTCCGCAAGC GCCTGCGCGA GGGCCAGCTG GATGACAAGG AGATCGAGAT CCAGGTGAGC GCCACCCCCG TGGGCGTGGA GATCATGACA CCGCCGGGCA TGGAGGAGAT GGCCAGCCAG CTGCAGAGCC TGTTCCAGAA CATCGGCGGT GGGCGCAGCC AGACCCGCAA GCTCAAGATC CGCGACGCCA TGAAGTTGCT CACGGATGAA GAGGCCGCGC GCATGGTCAA CCAGGACGAG CTCAAGCTGC GTGCCGTGGC CAACGTGGAG CAGAACGGCA TCGTGTTCCT GGACGAGATC GACAAGGTGG CCAAGCGCGG TGAATACGGC GGCGCCGACG TCTCCCGCGA GGGCGTACAG CGGGATCTGC TGCCCCTGGT GGAGGGCTGC ACCGTGAACA CCAAGTTCGG CATGGTGCGC ACCGACCACA TCCTGTTCAT CGCCTCCGGT GCGTTTCACC TGTCCAAGCC CTCGGACCTG ATCCCGGAGC TGCAGGGCCG CCTGCCGATT CGCGTGGAGC TGTCCGCGCT CACCGCCGAG GACTTCGTGC GCATCCTCAC CGAGCCCGAC GCCTCGCTCA CCGAGCAGTA CAGCGCGCTG CTCCAGACCG AGGGCGTGGA GGTGAACTTC GCCGAGGACG GCGTGCGGCG CATCGCCGAG ATCGCCACCC GGGTCAACGA GCGCACCGAG AACATCGGCG CCCGTCGCCT GCACACGGTG ATGGAGCGCC TGCTGGAGCA GATCTCCTTC GAGGCCCCGG ATCACCAGGG TCCGGTGAGC ATCGACGCCG CCTACGTGGA CGAGCGGCTC GAGGAGCTGG TGCAGGATGA GGATCTGAGT CGATATATTC TTTAA
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Protein sequence | MSDMTPREIV QELDKHIVGQ KDAKRAVAIA LRNRWRRQQL PEALRQEVTP KNILMIGPTG VGKTEIARRL ARLANAPFIK VEATKFTEVG YVGRDVESII RDLVDAAIKL LREQEMGKVR FRAEEAAEER VLDVLLPAPR QAGFMSEPAS APEQSETRQK FRKRLREGQL DDKEIEIQVS ATPVGVEIMT PPGMEEMASQ LQSLFQNIGG GRSQTRKLKI RDAMKLLTDE EAARMVNQDE LKLRAVANVE QNGIVFLDEI DKVAKRGEYG GADVSREGVQ RDLLPLVEGC TVNTKFGMVR TDHILFIASG AFHLSKPSDL IPELQGRLPI RVELSALTAE DFVRILTEPD ASLTEQYSAL LQTEGVEVNF AEDGVRRIAE IATRVNERTE NIGARRLHTV MERLLEQISF EAPDHQGPVS IDAAYVDERL EELVQDEDLS RYIL
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