| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0031 |
|---|
| Symbol | |
|---|
| ID | 7316681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 29590 |
|---|
| End bp | 30321 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643614921 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_002512122 |
|---|
| Protein GI | 220933223 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAC TGGTCGTCGA TGACGAGGCC CCGGCCCGGG AGCGTCTCGT CTCCCTGCTG
GAATCCCTCA GCCAATACGA GGTCTGCGGC ACCGCCGCCA ACGGCGTGCA GGCCGTGCGC
CTGGCCCAGG AGACCCAGCC GGACATCGTG CTCATGGACA TCCGCATGCC CGGCATGGAC
GGCCTCGAGG CGGCGCGCCA CATCTCCCAG ATGGACACGC CGCCTGCCGT CATCTTCGTC
ACCGCCTACG AGGAACACGC CATCGAGGCC TTCGAGACCC ACGCCGTGGG CTACCTGCTC
AAGCCCGTAC GCGGCGAGCG GCTCAAGGCG GCCCTGGAGG CGGCCGGCCG GCCCAACAAG
GCGCAGATGG GTGCGCTGGG CGGTTCCGTG GGTCAATCCA GCCGCAGCCA CATCTGCGCC
CGGGTGCGCG GCAACCTGGA ACTGATCCCG GTGGAGGACA TCCACTTTTT CCAGGCGGAC
CAGAAATACG TCACCGTGCG CCACACGGGC GGCGAGGTGC TCATCGAGGA GCCGCTGAAG
TCACTGGAAG AGGAGTTCGC CGACAGCTTC CTGCGCATCC ACCGCAACGC CCTGGTGGCT
AAGCACAGCT TCGGCGGCAT GGAGAAGAAC GCACAGGGGT GTTTCGAGGT GGTGCTCAAG
GGCACCGGGG AGCGCCTGGA GGTGAGCCGT CGTCACGTGG CAGAAGTACG CAAGTTCCTC
AAGTCCCTGT AG
|
|---|
| Protein sequence | MKVLVVDDEA PARERLVSLL ESLSQYEVCG TAANGVQAVR LAQETQPDIV LMDIRMPGMD
GLEAARHISQ MDTPPAVIFV TAYEEHAIEA FETHAVGYLL KPVRGERLKA ALEAAGRPNK
AQMGALGGSV GQSSRSHICA RVRGNLELIP VEDIHFFQAD QKYVTVRHTG GEVLIEEPLK
SLEEEFADSF LRIHRNALVA KHSFGGMEKN AQGCFEVVLK GTGERLEVSR RHVAEVRKFL
KSL
|
|---|
| |