Gene Tgr7_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_0007 
Symbol 
ID7316657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp9837 
End bp10604 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID643614898 
Productexodeoxyribonuclease III 
Protein accessionYP_002512099 
Protein GI220933200 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.454244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG CCACCTGGAA CGTCAACTCT CTCAAGGTGC GCCTGCCCCA GGTGCTCGAC 
TGGCTGGCCG CGCAGCAGCC GGACGTGCTG GCGCTCCAGG AGACCAAGCT CACCGATGAC
GCCTTCCCGG TGGAGGCCAT CCGCGAGGCC GGCTATCACT GCGTGTACTC GGGCCAGAAG
ACCTACAACG GCGTGGCCAT TCTGGCCAGG CACGAGCTGC TCGATCCGCT CACGGACATC
GACGGACTGG ATGATCCCCA GCGGCGCATC CTCGCCGCCA CGGTGGACGG CGTGCGCGTC
ATCAACCTGT ACGTGGTCAA TGGCTCGGAA GTGGGTTCTG AGAAGTACGC CTACAAGCTG
GACTGGCTGG GCAAGGTCAC CGGTTTCATC GCCGGGGAGA TGAAGCGCCA CGAAAAGCTC
GTGGTGCTGG GGGATTTCAA CATCGCCCCC GAGGACCGGG ACGTGCACGA CCCCGAGGCC
TGGCACGAGA AGATCCTCTG CTCCACCCCG GAGCGCGAGG CGCTGAAAAA GATCCTCGAC
CTGGGCCTGA GCGACTGCTT CCGCCGCTTC GAGCAGCCGG AGCAGAGCTT CTCCTGGTGG
GACTATCGTG CGGCGGGCTT CCGGCGCAAC CTGGGCCTGC GCATCGACCT GATCCTCTCG
AGCCCCGCGC TCACCGAGAC CTGCACCGCC TGCATCATCG ACGTGGAACC GAGGCGGTTG
GAACGTCCCT CCGATCACGC ACCCGTGGTG GCGGAGTTCG TGAGTTAA
 
Protein sequence
MKIATWNVNS LKVRLPQVLD WLAAQQPDVL ALQETKLTDD AFPVEAIREA GYHCVYSGQK 
TYNGVAILAR HELLDPLTDI DGLDDPQRRI LAATVDGVRV INLYVVNGSE VGSEKYAYKL
DWLGKVTGFI AGEMKRHEKL VVLGDFNIAP EDRDVHDPEA WHEKILCSTP EREALKKILD
LGLSDCFRRF EQPEQSFSWW DYRAAGFRRN LGLRIDLILS SPALTETCTA CIIDVEPRRL
ERPSDHAPVV AEFVS