Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0007 |
Symbol | |
ID | 7316657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 9837 |
End bp | 10604 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643614898 |
Product | exodeoxyribonuclease III |
Protein accession | YP_002512099 |
Protein GI | 220933200 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.454244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG CCACCTGGAA CGTCAACTCT CTCAAGGTGC GCCTGCCCCA GGTGCTCGAC TGGCTGGCCG CGCAGCAGCC GGACGTGCTG GCGCTCCAGG AGACCAAGCT CACCGATGAC GCCTTCCCGG TGGAGGCCAT CCGCGAGGCC GGCTATCACT GCGTGTACTC GGGCCAGAAG ACCTACAACG GCGTGGCCAT TCTGGCCAGG CACGAGCTGC TCGATCCGCT CACGGACATC GACGGACTGG ATGATCCCCA GCGGCGCATC CTCGCCGCCA CGGTGGACGG CGTGCGCGTC ATCAACCTGT ACGTGGTCAA TGGCTCGGAA GTGGGTTCTG AGAAGTACGC CTACAAGCTG GACTGGCTGG GCAAGGTCAC CGGTTTCATC GCCGGGGAGA TGAAGCGCCA CGAAAAGCTC GTGGTGCTGG GGGATTTCAA CATCGCCCCC GAGGACCGGG ACGTGCACGA CCCCGAGGCC TGGCACGAGA AGATCCTCTG CTCCACCCCG GAGCGCGAGG CGCTGAAAAA GATCCTCGAC CTGGGCCTGA GCGACTGCTT CCGCCGCTTC GAGCAGCCGG AGCAGAGCTT CTCCTGGTGG GACTATCGTG CGGCGGGCTT CCGGCGCAAC CTGGGCCTGC GCATCGACCT GATCCTCTCG AGCCCCGCGC TCACCGAGAC CTGCACCGCC TGCATCATCG ACGTGGAACC GAGGCGGTTG GAACGTCCCT CCGATCACGC ACCCGTGGTG GCGGAGTTCG TGAGTTAA
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Protein sequence | MKIATWNVNS LKVRLPQVLD WLAAQQPDVL ALQETKLTDD AFPVEAIREA GYHCVYSGQK TYNGVAILAR HELLDPLTDI DGLDDPQRRI LAATVDGVRV INLYVVNGSE VGSEKYAYKL DWLGKVTGFI AGEMKRHEKL VVLGDFNIAP EDRDVHDPEA WHEKILCSTP EREALKKILD LGLSDCFRRF EQPEQSFSWW DYRAAGFRRN LGLRIDLILS SPALTETCTA CIIDVEPRRL ERPSDHAPVV AEFVS
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