Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_0006 |
Symbol | |
ID | 7316656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 7739 |
End bp | 9799 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643614897 |
Product | Oligopeptidase A |
Protein accession | YP_002512098 |
Protein GI | 220933199 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACC CCTTGCTCAA GCAGGAAGGC CTGCCGGCCT TCAGCCAGAT CAGACCCGAA CACGTGGAGC CGGCCATCGA TCGCCTGCTG GCCGAGAACC GCGCCGCCAT TGCGAAACTG CTGGATCGGG ACAGTGGCTT TACCTGGCAG AACCTGGTGC ATCCCCTGTC CCTGCTGGAG GACCGGCTCA ACAGGGCCTG GTCGCCGGTT CGGCACATGA ACTCGGTGGT CAACAGCGAG GAGCTGCGCG CCGCCTACAA CGCCTGCCTG CCCAAGCTCT CCGATTACGG CACCGAGATC GGCCAGAACG CGGCGCTCTA CGCGGCCTAC AAGTCCCTGA GCGAGGGTCC CGGCGCCGGG GATCTGGACG AGGCCCAGCG CAAGGTGGTG CGCGATGCCC TGCGTGACTT CCATCTGAGC GGCGTGGATC TGCCGGAAGA CAAGAAGGCC CGCTACAAGG CCATTGCCCA GGAACTGTCC AATCTCCAGT CCCGTTTCGA GGAGAACATC CTGGACAGCA CCCACGCCTG GAAGAAACCG GTGCTGGACC GTGCGGCCCT GGCCGGACTG CCCGATTCCG CCCTGGACAT GCTGGCCCAG GCCTCCCGGC ACGCCGATCA GGAAGGCTGG CTGATTACCC TGGACTTCCC CGCCTACTAC GCGGTGATGA CCCATGCCGA GGACCGTGCG CTGCGCAAGG AGCTCTACAC TGCCTACGTG ACCCGGGCCT CCGACCAGGG GCCCCATGAC GGCAAGTACG ACAACAGCGC CCTGATGGAA CAGATCATGG CCCTGCGCCA TGAACAGGCC CAGTTGCTCG GCTATGGCGA TTTCGCGCAA TTGTCGCTGG CCACCAAGAT GGCGGAATCA CCCGAGGCCG TGGTGCACTT CCTCAAGGAC CTGGCGGCAC GCGCGAAGCC CCGTGCAGAG CAGGAACTCG ACGAACTGCG CCGCTTTGCC GCCGAGCACC TTTCGATCGA TGATCTGCAG GCCTGGGACA TCGCCTACGC CAGCGAGCAG CTGCGCCAGC ATGCCTATGC CCTGTCCCAG GAGGATCTCA AGCCCTACTT CCCGGTGAAC CGGGTGGTGC CCGGCCTGTT CAGCCTGGTG GAGCGCCTCT ACCAGGTGAG CATCGTAGAA GTGGACGGCG TGGACGTGTG GCATCCGGAC GTGCGCTTCT ACGAGATCCG TGATCCCGAC GGCACGCCCC GCGCACAGTT CTACCTGGAC CTCTACGCCC GGCCCAAGAA GCGCGGCGGC GCCTGGATGG ACGAGTGCAT GAACCGGGTG CGGGACGGGG ACCGGGTGCA GATCCCGGTC GCCTACATGA CCTGCAACTC CACCCCGCCG GTGGGCGACA AGCCGGCCCT GTTCACCCAT GACGAGGTGA TCACCCTGTT CCACGAGTTC GGCCACGGCC TGCACCACAT GCTCACCCGG GTGGACTATC CGGACATCGC CGGGATCAAC GGCGTAGAAT GGGACGCGGT GGAACTGCCC AGCCAGTTCA TGGAGAACTG GTGCTGGGAA AAAGAGGCCA TCGACCTGTT CGCCGGCCAC TACCAGACGG GCAAGCCGCT GCCCCAGGCG CTGTTCGACA AGCTCATTGC CACGCGCCAT TTCCAGGCGG CCATGCAGAT GGTGCGCCAG CTGGAATTCT CCCTGTTCGA CGTGCGCATT CACGGCGAGT ACGATCCGGC ACGGGGTGCG CGCATCCAGG AGATCCTCGA CCAGGTGCGC GCCGAGGTGT CGGTGGTCAA ACCGCCGGCC TTCAACCGCT TCCAGCACGG CTTCTCGCAC ATCTTCGCCG GCGGATACGC GGCGGGCTAT TACAGCTACA AGTGGGCCGA GGTCTTGTCC GCAGATGCCT TCGCCCGCTT CGAGGAGGAA GGCCTGTTCA GCCCCGACGT GGGCCGGGCG TTCCTTGAGA ACGTGCTGGA GAAGGGCGGC TCCGCGCCCG CCATCGAGCT GTTCAAGGCA TTCCGGGGAC GCGAGCCCAA GATTGATGCC CTGCTGAGGC ATTCGGGACT GATCGAGGAG TCCAGAGGCG CAGCCGCATG A
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Protein sequence | MENPLLKQEG LPAFSQIRPE HVEPAIDRLL AENRAAIAKL LDRDSGFTWQ NLVHPLSLLE DRLNRAWSPV RHMNSVVNSE ELRAAYNACL PKLSDYGTEI GQNAALYAAY KSLSEGPGAG DLDEAQRKVV RDALRDFHLS GVDLPEDKKA RYKAIAQELS NLQSRFEENI LDSTHAWKKP VLDRAALAGL PDSALDMLAQ ASRHADQEGW LITLDFPAYY AVMTHAEDRA LRKELYTAYV TRASDQGPHD GKYDNSALME QIMALRHEQA QLLGYGDFAQ LSLATKMAES PEAVVHFLKD LAARAKPRAE QELDELRRFA AEHLSIDDLQ AWDIAYASEQ LRQHAYALSQ EDLKPYFPVN RVVPGLFSLV ERLYQVSIVE VDGVDVWHPD VRFYEIRDPD GTPRAQFYLD LYARPKKRGG AWMDECMNRV RDGDRVQIPV AYMTCNSTPP VGDKPALFTH DEVITLFHEF GHGLHHMLTR VDYPDIAGIN GVEWDAVELP SQFMENWCWE KEAIDLFAGH YQTGKPLPQA LFDKLIATRH FQAAMQMVRQ LEFSLFDVRI HGEYDPARGA RIQEILDQVR AEVSVVKPPA FNRFQHGFSH IFAGGYAAGY YSYKWAEVLS ADAFARFEEE GLFSPDVGRA FLENVLEKGG SAPAIELFKA FRGREPKIDA LLRHSGLIEE SRGAAA
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