Gene Hore_23470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_23470 
Symbol 
ID7314230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2565508 
End bp2565924 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content37% 
IMG OID643612799 
Productcell shape determination protein CcmA 
Protein accessionYP_002510087 
Protein GI220933179 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000002252 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGGCA ACAAAAATGA TGGTAAGGTA ACAGAAGAGA TGAAAAGCAA AGTAGAAACT 
ATTCTAGGAA ATGGTACAAA AATAGAGGGG GACCTATTTA CAAAAGGTTC TTTAAGGGTT
GAAGGAGAAG TTATCGGCAA TATTAAAGCC GAGGGCGATC TTTTCGTAGG GGAAAAAGGC
AAACTAAAAA CTGAAATAGA TGCCAGAAAT GTTATTATTG CCGGAACCGT TAATGGTAAT
ATAGTAGCCA GGGAGAAACT GGAGATTCTC CCCAGCGGAC AATTAAATGG TGATATTAAA
ACCAAAAAGC TAAAAATTGA AGAAGGAGCA GTCTTTATTG GATCCAGCAG TCCCTTAAAT
GGAAAATCAG ATAATGATAA GTACAAAAAA GAAGCTGCTT CTACCAGGAA AAAGTAA
 
Protein sequence
MLGNKNDGKV TEEMKSKVET ILGNGTKIEG DLFTKGSLRV EGEVIGNIKA EGDLFVGEKG 
KLKTEIDARN VIIAGTVNGN IVAREKLEIL PSGQLNGDIK TKKLKIEEGA VFIGSSSPLN
GKSDNDKYKK EAASTRKK