Gene Hore_23290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_23290 
Symbol 
ID7314212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2548452 
End bp2549282 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content36% 
IMG OID643612781 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002510069 
Protein GI220933161 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTTACA ACCATAAAGA TATTGATGTT AACAGGCTTA ATCTCACCGA TATTGATATT 
TACCAATGTG GTCAAGAAAA ATGCAAACCG GGTCATTCTT ATGGGCCTGC CGTCAGGGAT
CATTATTTAA TTCACTTCAT ATATAATGGA AGGGGTATTT TCCAGGTAGG AGAGAATACT
TACCATTTAG AGGCAGGACA GGGCTTTTTA ATCTGCCCTG ATATAGTAAC ATACTATCAG
GCTGACAGGC ACAACCCCTG GGAATATGCC TGGATTGGTT TTCATGGGCT TAAAGCTAAA
GACTATTTAA ACCGGGCCAA CCTCAGCCTG GCTAATCCGG TATTCTCTGA TACTGATGGT
AGTCCCCTCA GGTTTATATT TGAGGAAATG ACCGCAGCCC GTAAATTAAA GAGATCACGG
GAAATTAAAC TGATCGGGCT TATTTATGTT TTTTTATCAC ACCTGATTGA ACTAAATGTA
TCTGGCTCTA CTCCCGATAA TAATTCAAAG GAAAATTACA TAAAAAAAGC TATAGAATAT
ATTGAGAAAA ATTATTCCCG ACATATTAAG GTAATTGATA TAGCAAATCA TGTTGGTCTC
GACAGGAGTT ATCTATGGTC TATTTTTAAT GAGTTTTTAA ATACTTCTCC CCAGCAATAC
CTTATTAATT ACAGAATTAA TAAGGCTTGT GAGCTAATGA AAAACAGAAA TTTAAATTTA
AGTATTGGTG ATATATCACG ATCTGTTGGT TATAAAGACC CTCTAACTTT TTCTAAAACC
TTTAAAAAAA CAAAGGGGAT ATCCCCTCTG CATTATCAAA AACAATCATA A
 
Protein sequence
MAYNHKDIDV NRLNLTDIDI YQCGQEKCKP GHSYGPAVRD HYLIHFIYNG RGIFQVGENT 
YHLEAGQGFL ICPDIVTYYQ ADRHNPWEYA WIGFHGLKAK DYLNRANLSL ANPVFSDTDG
SPLRFIFEEM TAARKLKRSR EIKLIGLIYV FLSHLIELNV SGSTPDNNSK ENYIKKAIEY
IEKNYSRHIK VIDIANHVGL DRSYLWSIFN EFLNTSPQQY LINYRINKAC ELMKNRNLNL
SIGDISRSVG YKDPLTFSKT FKKTKGISPL HYQKQS