Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_23220 |
Symbol | |
ID | 7314205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2540846 |
End bp | 2541592 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643612774 |
Product | putative sigma E regulatory protein, MucB/RseB |
Protein accession | YP_002510062 |
Protein GI | 220933154 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000000142114 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAATA AAACTACTAG AATACTATTA CTGATAATGA CAATGACTGT TGTGTTTTCT AGCCTGTCTA TAGCCATAAC ACCTGAAGAG ATTATAAACA GGCGGGATGA TAATGAATAT GTCCGGTCAG CTAAAATTGA GTCTGAAATG ATAATTATTA AAGGTAACAG GAAGATTATT AAAACCATGG TCTCAATAAC AGATGGGAAA AATGCCCTGG TGGAGTTTAT TAATCCCCTC GACAGGGGGA CTAAATTTTT GAAGAGGGAT GACAACCTCT TTATGTTCTT CCCCGACGCC GAGGACATTG TAAAGATATC GGGCCATATG CTGGAACAGG GTATTATGGG GAGTGATCTC TCCTATAAGG ATATTATGGA ATCAGACAAA TTAACCGAAC TTTATGATTT TAAAATATTG AGAGAAGAGG AATATCAGGG GCGCCCCTGT TATGTAATGG AAGGTATAGC CCGGGAAGGG GCCGAGGTTT CCTATTACAG GAGGGTAGCC TGGATAGATA AAGAGCGTTT TATTGGCCTT AAGGAAGAGC TATATGCCCG GAGTGGCCGG TTATTAAAGG TTATGAAGGT TGATAAGGTT GAAGAGATTG AGGGGCGGTA CTATCCGACT GAGTATATTA CTGAAGATAA ACTAATAAAA AACTCACGGA CCATCTTCAG GGTTAAATCA ATTAATTTTA ATCCCGAAAT ACCGGAAAAC ACCTTTACTC TGCAAAATTT AAACTGA
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Protein sequence | MFNKTTRILL LIMTMTVVFS SLSIAITPEE IINRRDDNEY VRSAKIESEM IIIKGNRKII KTMVSITDGK NALVEFINPL DRGTKFLKRD DNLFMFFPDA EDIVKISGHM LEQGIMGSDL SYKDIMESDK LTELYDFKIL REEEYQGRPC YVMEGIAREG AEVSYYRRVA WIDKERFIGL KEELYARSGR LLKVMKVDKV EEIEGRYYPT EYITEDKLIK NSRTIFRVKS INFNPEIPEN TFTLQNLN
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