Gene Hore_23060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_23060 
Symbol 
ID7314189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp2518649 
End bp2519566 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content46% 
IMG OID643612758 
Productcysteine synthase A 
Protein accessionYP_002510046 
Protein GI220933138 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000000000228532 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTT ACAAAAATGT CTCGGAGTTA ATAGGTAAAA CACCTATCGT AAAACTTAAC 
AGATTAAACC CTGAAAATTC ACCTGAAATT CTGGTCAAAC TGGAAATGTT CAATCCCGGA 
AGCAGTATTA AAGACAGAAT CTGCTATAAC ATGATCAGGG ATGCTGAAGA AAAAGGTAAA 
TTAAAACCTG GAGGCACCAT TGTAGAACCG ACCAGTGGTA ACACCGGAAT CGGCCTCTCC 
CTTATCGGGG CAGCCAGGGG TTATAATGTT ATCCTGACAA TGCCTGAGAC CATGAGTATT 
GAAAGGCGAA AGCTTTTAAA GGCCTTTGGG GCTCAGGTAG TCTTAACCCC CGGGGATAAA 
GGAATGCAGG GGGCAATCGA CAGGGCCCGG GAACTTGTCA AAAATAACGA TAACTACTTT 
ATGCCCCAGC AGTTCCAGAA CCCGGCCAAC CCGGAAATCC ATCGTAAAAC CACAGCAAAA 
GAAATCCTCG AAGATACTGA TGGTAAGATA GACTATTTTG TAGCCGGGGT CGGTACCGGC 
GGTACCCTGA CCGGAACCGG AGAGGTTTTA AAAGAACACA ATCCCAACAT TAAAGTAGTG 
GCGGTGGAAC CTGAAGATTC CCCGGTTCTC TCAGGAGGTG AGCCCGGCCC CCATCAAATA 
CAGGGTATTG GAGCCGGTTT TATCCCCGAT GTTCTGGATA CAGATTTAAT TGACAGGGTT 
ATTAAAGTCG GTAATGAAGA GGCTATGGAG ACAGCCAGAA ATCTGGCCAG ACAGGAGGGC 
CTCCTGGTCG GTATATCTTC CGGGGCAGCC GTTAAAGCTG CTCTAAAACT GGCCAAAGGA 
GTAGACCCTG ATAAAACTAT CCTGGTTATC GCCCCCGATA CCGGAGAAAG ATATTTAAGT 
ACTGATCTAT TCAAATAA
 
Protein sequence
MAIYKNVSEL IGKTPIVKLN RLNPENSPEI LVKLEMFNPG SSIKDRICYN MIRDAEEKGK 
LKPGGTIVEP TSGNTGIGLS LIGAARGYNV ILTMPETMSI ERRKLLKAFG AQVVLTPGDK 
GMQGAIDRAR ELVKNNDNYF MPQQFQNPAN PEIHRKTTAK EILEDTDGKI DYFVAGVGTG 
GTLTGTGEVL KEHNPNIKVV AVEPEDSPVL SGGEPGPHQI QGIGAGFIPD VLDTDLIDRV 
IKVGNEEAME TARNLARQEG LLVGISSGAA VKAALKLAKG VDPDKTILVI APDTGERYLS 
TDLFK