Gene Hore_22850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22850 
Symbol 
ID7313037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2495144 
End bp2496643 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content29% 
IMG OID643612737 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_002510025 
Protein GI220933117 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAG AACTGTTAGA TGTAACTAAA AAATCAGGGG TAGTTTTCAT TGGTCGCATA 
ATAGGGGTTT TATTCGGGCT TGTATTTAAT TTCATAGTCG CCCGATATAT GGGTGCTGAA
GCCTATGGAA GGTTTATGTA TGTCTATACT TTTATTAGTT TTTTCCCAAT TATAACCAGG
TTTGGGCTGG ACCAGGGCCT GGTCTCATTT TTGCCACCAT TGGTTGATGA TAATAAAGTG
GAAGAACGTA ATGGATTAAT AACCTCATCA ATATTATTTA CCTTAATAAC TGGTTTTGTT
TTATCTACTA TAATCATAAC TAATAGTAAA TTTATTGCCA CAAATATATT AAATAGTCCG
GAGTTAGTGG ATTTAATTAG ATATTCTACG CCTTTATTAA TTTTACTAGC TTTTACGCAG
TTATCCCGGG GCATATTCAG GGGAATAGGA ATAATAAAAT ATTTTGTTCA GGGTCAAAAT
ATACTAACTC CCATAGTAAA AATAGCCTGT ATAATAACAT TTTCATTTCT AGGATTTAAA
ATTTATGGTA TATTAATTTC TTTCTATATA TCTTTAGGTT TAACCAGTCT ATATTTATTT
TATAAAATTT TAAAAATGGG ATTTTTAAGT AGTATTAAAT CTATTAATCA TGGTCTATTA
AAAGATGTAT TCCGGTTTTC TTTTCCATTG TTGTTGACAG GTTTATTAGG ATTCTTAATA
AATAGAATTG ATACATTTAT GATTGGATAT TTTCTCTCTG ATGACAAAGT TGGCATTTAC
AACATAGCTC TAAGAATAGG TACAATGAGC AGTTTTATCC TAATAGCTTT TAATACCATG
TTTGCACCAA TGATTTCTTC TTTACACCAT AAAGGGGAAA TGGATAAACT TGCAGCTATG
TATAAAATAA TTACAAAATG GATTTTAGCA ATTAATTTAG TTGCTTTTTC TATTATTTTA
CTCTTTAACA GGGATATAAT GCATCTGTTT GGAAAAGAGT TTATAGCTGG ATCAACAGCT
TTAGTATTAA TATCAATAGG TCAGGTTGTT AATGCTGGCG TGGGTTCTGC AGGATATATT
AATGTTATGA CAGGGCATCC TCATTATGAA TTGTATACCA ACATATTAGT TGTGGGTATG
AATGTAACAT TAAACTATGC TTTAATACCC AACTATGGAA TAAATGGAGC AGCGGTTGCA
TCATTAATAT CAGTATCACT AACCAATATA ATAAAACTTT TATTAGTATA TAAAGATCAT
AAAATTCATC CATATAATTT TGATTATTTT AAAGTAGTTG GCTCTGTGAC AATTAGTTTT
ATGTTGGTTT ATTATTTAAA TAATATTATA CAAATTTTTT GGCTTATTAA ATTGTTATTA
TTAACATTCT TATTCTTTGT TATGACTGCA ATAATATATT ACTTCATAGG TGGTTTATCT
ACTGAAGACT TGCTTGTTTT AAAGAAATTA GTGGGAAAAC TGTATTATAG AAAAAAGTAA
 
Protein sequence
MEEELLDVTK KSGVVFIGRI IGVLFGLVFN FIVARYMGAE AYGRFMYVYT FISFFPIITR 
FGLDQGLVSF LPPLVDDNKV EERNGLITSS ILFTLITGFV LSTIIITNSK FIATNILNSP
ELVDLIRYST PLLILLAFTQ LSRGIFRGIG IIKYFVQGQN ILTPIVKIAC IITFSFLGFK
IYGILISFYI SLGLTSLYLF YKILKMGFLS SIKSINHGLL KDVFRFSFPL LLTGLLGFLI
NRIDTFMIGY FLSDDKVGIY NIALRIGTMS SFILIAFNTM FAPMISSLHH KGEMDKLAAM
YKIITKWILA INLVAFSIIL LFNRDIMHLF GKEFIAGSTA LVLISIGQVV NAGVGSAGYI
NVMTGHPHYE LYTNILVVGM NVTLNYALIP NYGINGAAVA SLISVSLTNI IKLLLVYKDH
KIHPYNFDYF KVVGSVTISF MLVYYLNNII QIFWLIKLLL LTFLFFVMTA IIYYFIGGLS
TEDLLVLKKL VGKLYYRKK