Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_22850 |
Symbol | |
ID | 7313037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2495144 |
End bp | 2496643 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643612737 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_002510025 |
Protein GI | 220933117 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGAAG AACTGTTAGA TGTAACTAAA AAATCAGGGG TAGTTTTCAT TGGTCGCATA ATAGGGGTTT TATTCGGGCT TGTATTTAAT TTCATAGTCG CCCGATATAT GGGTGCTGAA GCCTATGGAA GGTTTATGTA TGTCTATACT TTTATTAGTT TTTTCCCAAT TATAACCAGG TTTGGGCTGG ACCAGGGCCT GGTCTCATTT TTGCCACCAT TGGTTGATGA TAATAAAGTG GAAGAACGTA ATGGATTAAT AACCTCATCA ATATTATTTA CCTTAATAAC TGGTTTTGTT TTATCTACTA TAATCATAAC TAATAGTAAA TTTATTGCCA CAAATATATT AAATAGTCCG GAGTTAGTGG ATTTAATTAG ATATTCTACG CCTTTATTAA TTTTACTAGC TTTTACGCAG TTATCCCGGG GCATATTCAG GGGAATAGGA ATAATAAAAT ATTTTGTTCA GGGTCAAAAT ATACTAACTC CCATAGTAAA AATAGCCTGT ATAATAACAT TTTCATTTCT AGGATTTAAA ATTTATGGTA TATTAATTTC TTTCTATATA TCTTTAGGTT TAACCAGTCT ATATTTATTT TATAAAATTT TAAAAATGGG ATTTTTAAGT AGTATTAAAT CTATTAATCA TGGTCTATTA AAAGATGTAT TCCGGTTTTC TTTTCCATTG TTGTTGACAG GTTTATTAGG ATTCTTAATA AATAGAATTG ATACATTTAT GATTGGATAT TTTCTCTCTG ATGACAAAGT TGGCATTTAC AACATAGCTC TAAGAATAGG TACAATGAGC AGTTTTATCC TAATAGCTTT TAATACCATG TTTGCACCAA TGATTTCTTC TTTACACCAT AAAGGGGAAA TGGATAAACT TGCAGCTATG TATAAAATAA TTACAAAATG GATTTTAGCA ATTAATTTAG TTGCTTTTTC TATTATTTTA CTCTTTAACA GGGATATAAT GCATCTGTTT GGAAAAGAGT TTATAGCTGG ATCAACAGCT TTAGTATTAA TATCAATAGG TCAGGTTGTT AATGCTGGCG TGGGTTCTGC AGGATATATT AATGTTATGA CAGGGCATCC TCATTATGAA TTGTATACCA ACATATTAGT TGTGGGTATG AATGTAACAT TAAACTATGC TTTAATACCC AACTATGGAA TAAATGGAGC AGCGGTTGCA TCATTAATAT CAGTATCACT AACCAATATA ATAAAACTTT TATTAGTATA TAAAGATCAT AAAATTCATC CATATAATTT TGATTATTTT AAAGTAGTTG GCTCTGTGAC AATTAGTTTT ATGTTGGTTT ATTATTTAAA TAATATTATA CAAATTTTTT GGCTTATTAA ATTGTTATTA TTAACATTCT TATTCTTTGT TATGACTGCA ATAATATATT ACTTCATAGG TGGTTTATCT ACTGAAGACT TGCTTGTTTT AAAGAAATTA GTGGGAAAAC TGTATTATAG AAAAAAGTAA
|
Protein sequence | MEEELLDVTK KSGVVFIGRI IGVLFGLVFN FIVARYMGAE AYGRFMYVYT FISFFPIITR FGLDQGLVSF LPPLVDDNKV EERNGLITSS ILFTLITGFV LSTIIITNSK FIATNILNSP ELVDLIRYST PLLILLAFTQ LSRGIFRGIG IIKYFVQGQN ILTPIVKIAC IITFSFLGFK IYGILISFYI SLGLTSLYLF YKILKMGFLS SIKSINHGLL KDVFRFSFPL LLTGLLGFLI NRIDTFMIGY FLSDDKVGIY NIALRIGTMS SFILIAFNTM FAPMISSLHH KGEMDKLAAM YKIITKWILA INLVAFSIIL LFNRDIMHLF GKEFIAGSTA LVLISIGQVV NAGVGSAGYI NVMTGHPHYE LYTNILVVGM NVTLNYALIP NYGINGAAVA SLISVSLTNI IKLLLVYKDH KIHPYNFDYF KVVGSVTISF MLVYYLNNII QIFWLIKLLL LTFLFFVMTA IIYYFIGGLS TEDLLVLKKL VGKLYYRKK
|
| |