Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_22710 |
Symbol | |
ID | 7313023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2479005 |
End bp | 2479931 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643612723 |
Product | ABC-type sugar transport system, periplasmic component |
Protein accession | YP_002510011 |
Protein GI | 220933103 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.0934818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATA AAGCAAAAGG TTTAGTAGTA TTACTGGTAG CGGTGATGGT TTTAGGTTTA AGTCAATTTG CCCTGGCTGA TGATATTACC ATAGGGGCTT CTTTACTGAC ACAGCAGCAT CCCTTTTATG TCCAGCTAAA ACAGGCTATG GAAAAAGCTG CTGACGATAA TGGTGTTGAA TTAATAGTTT CTATTGCCAA TCAGGATTTA AACAAACAGA TTTCTGATGT TGAAGACTTT ATCGTCAGGG GTGTTGATGC TATTGTCCTG AGTCCGGTTG ATTCCAAGGG TGTTGTCGGG GCTATTATTA AAGCTAAAAG GGCCGGCATC CCTGTAATCA CTGTTGATAT CTCTGCTGAA GGTGTAGAAG TAGATGCTCA TGTTGCTACT GACAACTATT ATGGTGGCAG AATCGCTGGA GAAACCATGG CTAAAGTTTT AAATGGAAAA GGACAGGTTG CCATTATTGA CTACCCTGTA GTTCAGTCTG TAAGGGACAG GGTTGCCGGT TTTAAAGAAG CTGTCAGTAA ATACCCCGGT ATTGAAATTG TTGCTATTCA GCCCGGTATC ACCAGACCTG AGGCTTTAAA TACTGCCCAG AATATCCTTC AGGCCCATCC TGAAGTAGAT GGTATCTTTG GTTTTGGTGA TGACGCTGCC CTGGCTTCTG TAGTGGCTGT TAAATCTGCC GGTATGGAAG ATGATGTTAA GGTAATCGGT TTTGACGGAA TGGAAGAAGC CCGCAATGCA GTTAAGAAAG AAGAGTCCTT TGTAGCAGTT GTCTGTCAGT ATCCCGGTGA AATGGGTCGT CTCGGATTGG AAACAGCTCT CAGGGTAATT AAAGGAGAAA AAGTTGAAAA AGAAATCCCG GTTCTACCCG GTCTTTTCAC CAAAGAGGGA GAACAGAAAA AAGTAGTACT TGACTAG
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Protein sequence | MTNKAKGLVV LLVAVMVLGL SQFALADDIT IGASLLTQQH PFYVQLKQAM EKAADDNGVE LIVSIANQDL NKQISDVEDF IVRGVDAIVL SPVDSKGVVG AIIKAKRAGI PVITVDISAE GVEVDAHVAT DNYYGGRIAG ETMAKVLNGK GQVAIIDYPV VQSVRDRVAG FKEAVSKYPG IEIVAIQPGI TRPEALNTAQ NILQAHPEVD GIFGFGDDAA LASVVAVKSA GMEDDVKVIG FDGMEEARNA VKKEESFVAV VCQYPGEMGR LGLETALRVI KGEKVEKEIP VLPGLFTKEG EQKKVVLD
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