Gene Hore_22710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22710 
Symbol 
ID7313023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2479005 
End bp2479931 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content43% 
IMG OID643612723 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_002510011 
Protein GI220933103 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0934818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA AAGCAAAAGG TTTAGTAGTA TTACTGGTAG CGGTGATGGT TTTAGGTTTA 
AGTCAATTTG CCCTGGCTGA TGATATTACC ATAGGGGCTT CTTTACTGAC ACAGCAGCAT
CCCTTTTATG TCCAGCTAAA ACAGGCTATG GAAAAAGCTG CTGACGATAA TGGTGTTGAA
TTAATAGTTT CTATTGCCAA TCAGGATTTA AACAAACAGA TTTCTGATGT TGAAGACTTT
ATCGTCAGGG GTGTTGATGC TATTGTCCTG AGTCCGGTTG ATTCCAAGGG TGTTGTCGGG
GCTATTATTA AAGCTAAAAG GGCCGGCATC CCTGTAATCA CTGTTGATAT CTCTGCTGAA
GGTGTAGAAG TAGATGCTCA TGTTGCTACT GACAACTATT ATGGTGGCAG AATCGCTGGA
GAAACCATGG CTAAAGTTTT AAATGGAAAA GGACAGGTTG CCATTATTGA CTACCCTGTA
GTTCAGTCTG TAAGGGACAG GGTTGCCGGT TTTAAAGAAG CTGTCAGTAA ATACCCCGGT
ATTGAAATTG TTGCTATTCA GCCCGGTATC ACCAGACCTG AGGCTTTAAA TACTGCCCAG
AATATCCTTC AGGCCCATCC TGAAGTAGAT GGTATCTTTG GTTTTGGTGA TGACGCTGCC
CTGGCTTCTG TAGTGGCTGT TAAATCTGCC GGTATGGAAG ATGATGTTAA GGTAATCGGT
TTTGACGGAA TGGAAGAAGC CCGCAATGCA GTTAAGAAAG AAGAGTCCTT TGTAGCAGTT
GTCTGTCAGT ATCCCGGTGA AATGGGTCGT CTCGGATTGG AAACAGCTCT CAGGGTAATT
AAAGGAGAAA AAGTTGAAAA AGAAATCCCG GTTCTACCCG GTCTTTTCAC CAAAGAGGGA
GAACAGAAAA AAGTAGTACT TGACTAG
 
Protein sequence
MTNKAKGLVV LLVAVMVLGL SQFALADDIT IGASLLTQQH PFYVQLKQAM EKAADDNGVE 
LIVSIANQDL NKQISDVEDF IVRGVDAIVL SPVDSKGVVG AIIKAKRAGI PVITVDISAE
GVEVDAHVAT DNYYGGRIAG ETMAKVLNGK GQVAIIDYPV VQSVRDRVAG FKEAVSKYPG
IEIVAIQPGI TRPEALNTAQ NILQAHPEVD GIFGFGDDAA LASVVAVKSA GMEDDVKVIG
FDGMEEARNA VKKEESFVAV VCQYPGEMGR LGLETALRVI KGEKVEKEIP VLPGLFTKEG
EQKKVVLD