Gene Hore_22560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22560 
Symbol 
ID7313008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2460023 
End bp2462002 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content41% 
IMG OID643612708 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002509996 
Protein GI220933088 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAT TTTTCAAAGA ACGCCTTACA GTCAGGAATA AATTGTTGAC TTTTATACTG 
GTGCCTTTAC TTGTTATTCT TGGAGTTGTT TTATTTGTTA ATTATAATTC TACTGTGGAC
CATGTAGTGG AGATTGTTGA GGAAAATGGT AACCAGCAGG TTGAGGCTAT GGCCAGGCTG
GTGAATAACT GGATTGAAGC AAAGGTTAAT GAAGTCAAGG TTTTATCTAA AGCAATAGAC
CTGAAAGAGG GCTGGAATTT AAATCAGGAA TCAGGCTGGT TATACATAAA AGAATTAGAG
AGGAAATCAC TTGAAGGAAC ATATGAAAAT ATTTTACTGA TGGATTTAGA GGGTAATACC
TGGACTACCC AGGATAATAA AATATATGAT TATACAAATA GAGACTTTTT CCAGAAGGTG
AAAAAGACTG ACAGTCTTTA TATCAGTGAC CCCATCCATT CCCGCCTGAC CAACCAGGAT
GTCTTTGTTA TTGCAGTCCC GGTAAAAGAT AACACCGGGA AGACGGTGGC TATTGTCGGG
GGGACGGTAT TATTAAAACC ACTACAAAAT ATTGTAAACG ACTTTAAACT CGGGGAGACC
GGTTATGCCT ACCTGGTAAA AAGTGATGGA GTTGTAGTTG CTCATCCAAC CCAGTCAATG
GAGTTGAATT TACTAAATGA TCAGACAAGC ACCCAGAAGT TGATAGAAAT AACCAGGAAA
ATGATAGCAG GAGAAACCGA TAGAGATAAA TATACATACC AGGGTGTAGA AAAGTATGTA
TTCTACCATC CGGTTGAATG GGTAGACTGG TCACTTGGTC TTACTGTACC GGTAGAGGAG
TTAACTGTAG CAGCCCGGGA ACTGACACAA CAGTCAATTA TAGGTTATCT GGCTCTGTTT
ATAATTATTT CCATAATTGT TTACCTTGTA ACTGGCTCAA TTGCCAAAAT AATCTATAAT
ATTCAGAAGG TATTAGGTAA GGTTGCTGAT GGGGATTTTA CTGACAAGGT ACATGTAAAG
AGTAATGATG AACTGGGGAG AATGGCTGAA GATCTTAACA GGACCATCGA TAATCTTGAG
GATATGCTAA ACAGGGTCAA AAAGGCATCG GCAGGGGTAA CTAATTCTTC CAATGAAATA
GCTGAAGGAA ACCAGGACTT ATCTCAGCGA ACCCAGGAAC AGGCTTCTTC CCTTGAAGAA
GTGTCTGCAA CCATTGAAGA GGTATCATCA GCCATTGAAG AGGTTGCTGC CAGCTCTGAA
AATGCAGAAA ATCTGGGTGA AAAAACAATG GATGTCGTAA AACAGGGGTC ACGGGTTGTT
GAAAAGACAA TGCAGTCAAT GTCTGAAATT ACGGCAAGCA GCAAACAGAT AGCTGATATT
ATTACCACGG TTAACGACAT TGCCTTTCAG ACCAATTTGC TGGCATTAAA TGCTGCTGTA
GAGGCAGCAA GGGCTGGAGA ACACGGTAAA GGATTTGCTG TTGTGGCAGC AGAGGTCAGG
AACCTGGCCG GTAGGACAGC AGAGTCTGCC GGTGAGATCG AAAAATTAAT TACCAGTATT
ATTAAACAGA TTGAAGATGG TAATCAGCTA GTTGACAGGA CCGGCAAATC ATTAAATGAA
ATCGTTGAAT ACGGTAAGCA GACCACCCAG GCCATTAAAG AAATAGCTGC AGCTATGCAG
GAACAGGCTT CTGCCGCTGA ACAAATTCAA ACATCGGTCA GTGAGCTGGA CCAGGTGACC
CAGCAGAATG CAGCCCTTGT GGAAGAGATT GCCAGTGCCA GTGAATCACT CAATGACGAG
TCTGAAGAGA TGATGGCTCT GGTCAGGAAG TTTAAGTTAA ATACTACTGA TGAGGTGTCT
GGGGAGGGTG ATAATGGTAG CAAATTGAAA CAGGCCATGA ATAATAAGGG TGAAAAAGGT
TTATTACTGG AAAGGGAAGA AGAGATTAAG TTTAATGAGG ACGATTTTGA AAAATTTTAA
 
Protein sequence
MFKFFKERLT VRNKLLTFIL VPLLVILGVV LFVNYNSTVD HVVEIVEENG NQQVEAMARL 
VNNWIEAKVN EVKVLSKAID LKEGWNLNQE SGWLYIKELE RKSLEGTYEN ILLMDLEGNT
WTTQDNKIYD YTNRDFFQKV KKTDSLYISD PIHSRLTNQD VFVIAVPVKD NTGKTVAIVG
GTVLLKPLQN IVNDFKLGET GYAYLVKSDG VVVAHPTQSM ELNLLNDQTS TQKLIEITRK
MIAGETDRDK YTYQGVEKYV FYHPVEWVDW SLGLTVPVEE LTVAARELTQ QSIIGYLALF
IIISIIVYLV TGSIAKIIYN IQKVLGKVAD GDFTDKVHVK SNDELGRMAE DLNRTIDNLE
DMLNRVKKAS AGVTNSSNEI AEGNQDLSQR TQEQASSLEE VSATIEEVSS AIEEVAASSE
NAENLGEKTM DVVKQGSRVV EKTMQSMSEI TASSKQIADI ITTVNDIAFQ TNLLALNAAV
EAARAGEHGK GFAVVAAEVR NLAGRTAESA GEIEKLITSI IKQIEDGNQL VDRTGKSLNE
IVEYGKQTTQ AIKEIAAAMQ EQASAAEQIQ TSVSELDQVT QQNAALVEEI ASASESLNDE
SEEMMALVRK FKLNTTDEVS GEGDNGSKLK QAMNNKGEKG LLLEREEEIK FNEDDFEKF