Gene Hore_22500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22500 
Symbol 
ID7313002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2452543 
End bp2453718 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content42% 
IMG OID643612702 
Productbeta-lactamase domain protein 
Protein accessionYP_002509990 
Protein GI220933082 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000416658 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCTG TAAAGATTAA AGAAGGAGTA TACTGGGTTG GAGGAATAGA CTGGAACTTG 
AGGAACTTTC ACGGGTATTT AACCCAGCGG GGTTCTACTT ATAATGCCTA TTTAATTGTT
GATGAAAAAG TTACCCTGGT TGATACAGTA AAACATTATC TCTATGATGA GATGATTGAG
AGGATATCAA GTATCATCGA TCCCTCAGAA ATAGATTATA TTGTATCTAA CCATGTGGAA
ATGGATCATT CAGGGGGATT ACCGAAGCTT ATGGAAGTTA CCGGGGCTAC CCTGTTTACC
TCACCCAAGG GCAAGGAAGG CCTCGAATTT CATTATGACA GTAGTGACTG GGATATGAAA
GTGGTGAAAC CGGGAGCCCC TCTGGAACTG GGTAAGCGGA CCCTTAATTT CATCCTGACT
CCCATGGTTC ACTGGCCGGA TAATATGGTG GTTTATATGC CGGAAGAGAA AATATTATTC
TCAAATGATT CCTTTGGCCA GCATTATGCT ACATCGGAGA GGTTTGATGA TGAAGTATTA
CTGGATATTG CCCTCGAAGA AGCCAAAAAA TATTTTGCCA ATATAGTAAT GGGTTATCGA
GGACAGGTAA AACGGGAACT GGATGCTATC GAGAACCACG GGCTGGAACT AGATATTATT
GCTCCCTCTC ACGGGATTGT CTGGCGGAAA TATACCGATA AAATCATAGC GGCCTACCGA
AAGTGGGCTG GCAATAAAAC AGATAATAAA GCTGTTGTTG TCTATGACAC CATGTGGGGT
TCGACAGAGG AGATTGCCTA TCGTATTGTA GAGATGTTCG AAGGGCTTGG TGTAGAGACG
GCCTTACGTA ATTTGAAAAA AAATCACATT TCAGATGTAA TAACTGATGT TATTGACGCT
GAATATATCT GTGTCGGGTC ACCGACTTTA AATAATAATA TGCTGCCGAC CGTTGCCTCC
TTTTTGACAT ATTTAAAGGG TCTAAGTCCC CGGGGCAGAA AGGCCCTTGC TTTCGGTTCA
TATGGCTGGA GTGGCCAGAG TATCGGTCAG GTAGCAGATA TGCTGGAGGA GTCTAAATTT
GGTGTCCTGG GCCAGATTAA AATCAGGTAC AGGCCAGTTA AGGAAGATTT AAAAGCAAAA
ATTAATGAAA TTAAAGGGGA GATTAAAAAG AAATAA
 
Protein sequence
MKAVKIKEGV YWVGGIDWNL RNFHGYLTQR GSTYNAYLIV DEKVTLVDTV KHYLYDEMIE 
RISSIIDPSE IDYIVSNHVE MDHSGGLPKL MEVTGATLFT SPKGKEGLEF HYDSSDWDMK
VVKPGAPLEL GKRTLNFILT PMVHWPDNMV VYMPEEKILF SNDSFGQHYA TSERFDDEVL
LDIALEEAKK YFANIVMGYR GQVKRELDAI ENHGLELDII APSHGIVWRK YTDKIIAAYR
KWAGNKTDNK AVVVYDTMWG STEEIAYRIV EMFEGLGVET ALRNLKKNHI SDVITDVIDA
EYICVGSPTL NNNMLPTVAS FLTYLKGLSP RGRKALAFGS YGWSGQSIGQ VADMLEESKF
GVLGQIKIRY RPVKEDLKAK INEIKGEIKK K