Gene Hore_22060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_22060 
Symbol 
ID7313754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2402428 
End bp2403618 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content42% 
IMG OID643612658 
Productthiamine biosynthesis protein ThiI 
Protein accessionYP_002509946 
Protein GI220933038 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0301] Thiamine biosynthesis ATP pyrophosphatase 
TIGRFAM ID[TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.733648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAAG TTATTCTGAT TCGCTATGGA GAGATAGCCC TTAAGGGTCA AAACAGGCAT 
GTTTTTATCA ATAAACTGAT TGAAAATATA AAAGAAAGCT TAAAAGGAGT CGGTGAATAC
AAACTTAAAA AAACCCTAGG CCGAATCTAT GTTTTTCCTA ACGATAATAT AAATCAGTTT
ATAGAAAAAC TTAAAATGGT ACCCGGTATA GTATCCCTGA GTCCCACAGC TGTCTGTCCG
CTTGATTTTG ACAGTCTTAA AGAAACATCA GTAAAGGTCT TAAAAGATGC TATTAATGAT
TACCCGGCCA CTTTTAAAGT AGAAACCAGA CGGGCCAACA AACAATTCCC CTATAAAAGC
CCGGAGGTCA GCCGGGAGAT CGGAGCTCAT CTTTTAAGAA GCATAAATAC CCCTGACCAC
AATATCCTGA CAGTTGATGT CCATAACCCC CGGTACACTT TAAAAATAGA AATTAGAAAG
AAAAATATAT ATGTCTTCAC AAGATCTATT TCAGGGCCGG GTGGGTTGCC GGTCGGTTCC
AGCGGTAAGG GGCTTTTACT CCTGTCGGGG GGAATTGATA GCCCGGTAGC CGGCTGGCTG
GCCATGAAAA GGGGAATTGA GCTTGAAGCT CTATATTTCC ATAGCTTCCC CTATACCAGT
GACCGGGCTA AAGAAAAGGT TATTGACTTA ACTAAAGTAT TAAGCCGCTA CTGTAAAAAA
ATAAAATTAT ATGTGGGTTA TTTTACAGAT ATTCAGAGGG CTATCCAGGA AAACTGCCCT
CAGAAATACT ATATCACCAT CATGAGGAGA ATGATGTACA GGATGGCTGA GAGAATCGCC
AGGAAAAACG GAGATCTGGT TTTAATTACC GGAGAAAGTG TCGGCCAGGT GGCCAGTCAG
ACCCTGGAAA GTATGAATGT CATAAATGAA GTAACCAATA TGCCTGTCCT CCGTCCCCTG
GCAACAATGA ATAAAACTGA AATTATGGAC CTGGCCCGGG AGATCGGAAC CTATGATATC
TCAATTCTTC CCCATGAAGA CTGCTGTACC ATCTTTGTCC CCAGACATCC GGTTACCAGG
CCCAGGCTTG ACAGAACCCT CAAGGCTGAA GAAAAATTAA AAGCCGAAAT AGACGGTCTC
CTTGAAGATG CCATAGAAAA AACCGAAATC CTTGAAATAA AACATGGTTA A
 
Protein sequence
MYKVILIRYG EIALKGQNRH VFINKLIENI KESLKGVGEY KLKKTLGRIY VFPNDNINQF 
IEKLKMVPGI VSLSPTAVCP LDFDSLKETS VKVLKDAIND YPATFKVETR RANKQFPYKS
PEVSREIGAH LLRSINTPDH NILTVDVHNP RYTLKIEIRK KNIYVFTRSI SGPGGLPVGS
SGKGLLLLSG GIDSPVAGWL AMKRGIELEA LYFHSFPYTS DRAKEKVIDL TKVLSRYCKK
IKLYVGYFTD IQRAIQENCP QKYYITIMRR MMYRMAERIA RKNGDLVLIT GESVGQVASQ
TLESMNVINE VTNMPVLRPL ATMNKTEIMD LAREIGTYDI SILPHEDCCT IFVPRHPVTR
PRLDRTLKAE EKLKAEIDGL LEDAIEKTEI LEIKHG