Gene Hore_21960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21960 
Symbol 
ID7313744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2387845 
End bp2390529 
Gene Length2685 bp 
Protein Length894 aa 
Translation table11 
GC content45% 
IMG OID643612648 
Productcation-transporting ATPase A, P type (ATPase, E1-E2 type) 
Protein accessionYP_002509936 
Protein GI220933028 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01116] sarco/endoplasmic reticulum calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAT GGTATAACAA ATCTATTGAA GAAGTATCAA AGGATCAAAA AACAAATATT 
GATCAGGGGT TAACAGTTGA AGAGGCAAAA AAACGGCTGG ATGAAACAGG CCCCAATAGG
TTAAAAGAAA GCAAAGGACG TTCCCCCTGG CAGATGTTTA TCGACCAGTT TAAAGATGCG
CTGGTCATTA TCCTTTTATT TTCTGCTATA ATTTCAGCAG CAGTCGGTGA AATTAGTGAT
TCGTTGGTTA TCGCCGTTAT CCTTATTTTA AATTCAACCC TGGGGGTTAT TCAGGAATAT
AAAGCCGAGA AATCGCTGGC GGCCTTAAAG GAACTCGCTT CTCCCAGGGC CCTCGTTCTC
CGGGACGGGA AACAACAAAA AGTCGAAGCC AGCCAGCTGG TACCCGGAGA TATTGTCCTG
CTTGATGCCG GTGATTATGT CCCGGCAGAT TTAAGGCTTA TCTCCGTAAC AGATTTAAAA
ATTGAAGAAT CAGTCCTTAC CGGTGAATCG GTCCCGGTTG AGAAAACCGA TAAGATAATT
AAAGATGAAA AACCACCCCT CGGTGACCAG AAAAATATGG CCTTCATGGG GACTATTGTT
ACCTATGGAA GGGGTCGCGG AATTGTTACC GGAACTGGAA TGGATACAGA AATGGGTAAA
ATTGCTGAAG CCCTGAAAGA TGATAAACGG GAGCCCACTC CCCTGCAAAA AAGACTGGAT
AGAATGGGGA AAAAGCTTGG CCTTGCTGTT ATTGGCATAG CTGCCATTAT CATTCTGATG
GGATGGCTGC GTGGTATTGA TTTACTGGAA ATGTTTATGA CCGGAATCTC CCTGGCTGTA
GCGGCAGTTC CCGAAGGCCT TCCTGCCGTT GTCACCATCG TCCTCGCCCT CGGGGTCCAG
CGTATGATTA AAAGACACGC CATAATTCGT CGTCTCCCGG CTGTTGAGAC CCTGGGAGCC
ACTACTATTA TATGTACAGA TAAAACGGGA ACACTAACTA AAAATGAGAT GACCGTTAAG
TCCATTTTCC TTCCCGGACG AAATATCAAG GTAAGTGGTG AGGGGTATAA ACCGGAAGGC
AAGTTTATAG AGGGCAACAC AGAAGTCAAA ACTAATTCCG ACAAAGACCT GGCCCTTTTA
CTTAAAGCTG CCTCTCTCTG TAATAATGCA GAATTAACCC GTAATAAGGA TAATAACCGG
GATATTATTG GTGACCCCAC TGAAGGGTCC CTAGTAGTAG CTGCTGAAAA AGCAGGTTTT
ACAAAAGAAA GGCTTAATAA TGATTATGAG CGTATTAAAG AATTCCCTTT TGACTCAGAA
AGAAAACGAA TGTCAACCGT TCACCGGACT CCTGATAAAA AAGTTATAGC ATTTGTTAAA
GGGGCCCCTG ATCAGATACT AAAACGGTGC ATCGGTTATC AAATTAACGG TAAGGTTAAG
GACCTTGATG ATAACGTGAG AGAAGAAATT GTAAAGCAGA ATAAGGAATA TGCCTCACAG
GCTTTGAGGG TCCTGGCAGT TGCCTATAAA CCACTGGACG GAGAAAATAA TTTACATATT
GACAATGTTG AAAAGGGGTT AATTTTCCTC GGTTTGATGG GTATGATTGA CCCACCACGG
CGGGAGGTCG CTGATTCAGT TAAGTTATGC AAACAGGCCG GGATTCGCCC GGTTATGATT
ACCGGTGATT ACTCTCTGAC GGCACGGGCC ATTGCTGAAG AACTCGGTAT ATATAAAAAT
GGGGATAAAA TCATTACCGG CAGTGAACTG GAAGATATGA ACCCTGAAGA ACTTAAAGAA
GCTGTTTCCC TGACAACTGT CTATGCCCGG GTATCACCCC ACCATAAGAG CAAAATAGTT
CAGGCCCTTA AAGATAGTAA TGAAGTGGTA GCTATGACCG GTGATGGTGT TAATGATGCT
CCGGCCCTTA AAAAGGCAGA TATAGGGGTA GCCATGGGTA TTACAGGTAC CGATGTAGCC
AAAGAAGCGG CGGACATGGT CTTAACCGAT GATAATTTTG CTTCAATTGT CTCGGCCGTT
GAAGAAGGCA GAGGGATTTA CTCCAATATC AAGAAATTTA TTCATTTTCT ACTATCATGT
AATGTCGGAG AGATAATAAC CCTCTTCCTG GCAATCATAG TCGGTTTGCC ACGTCCTTTA
ATCCCAATCC AGATCCTCTG GGTAAACCTG GTGACCGATG GGTTCCCGGC CCTGGCCCTG
GGGGTTGACC CGGCTGCTCC CGATTTAATG GAAAAACCAC CCCGTGACCC TGATGAGGGG
GTCTTTGCCG GAAAAATGGG GGTCAATATA ATAAGCCAGG GACTTTTTAT CGGACTATTA
ACACTGGTTA TATTTTTCCT GGGGTTACAC TATTTTTCCC TGCCGGTAGG CCAGACTATG
GCTTTTGCCA CCCTGAGTTT TTCCCAGCTA ATTCAGGCTT TAAATGCCCG TTCCCGGGAG
TATTCTCTCT TCAGACTGGG TATTCTCACC AATAAATATC TAATTCTGGC CATAATGATA
TCAGGCCTGT TACAGCTTGG GGTAATGTTT ATCCCCTTCC TCCAGGCTGC CTTTAAAGTT
ATCCCCTTAA CCGGAACCCA GTGGCTTATT GTTTTACTGG CCTCACTAAC CCCCTTGCCC
TATGTTGAAA TCCTGAAAGC CCTGGGTATA ACCCGGGAAG AATAG
 
Protein sequence
METWYNKSIE EVSKDQKTNI DQGLTVEEAK KRLDETGPNR LKESKGRSPW QMFIDQFKDA 
LVIILLFSAI ISAAVGEISD SLVIAVILIL NSTLGVIQEY KAEKSLAALK ELASPRALVL
RDGKQQKVEA SQLVPGDIVL LDAGDYVPAD LRLISVTDLK IEESVLTGES VPVEKTDKII
KDEKPPLGDQ KNMAFMGTIV TYGRGRGIVT GTGMDTEMGK IAEALKDDKR EPTPLQKRLD
RMGKKLGLAV IGIAAIIILM GWLRGIDLLE MFMTGISLAV AAVPEGLPAV VTIVLALGVQ
RMIKRHAIIR RLPAVETLGA TTIICTDKTG TLTKNEMTVK SIFLPGRNIK VSGEGYKPEG
KFIEGNTEVK TNSDKDLALL LKAASLCNNA ELTRNKDNNR DIIGDPTEGS LVVAAEKAGF
TKERLNNDYE RIKEFPFDSE RKRMSTVHRT PDKKVIAFVK GAPDQILKRC IGYQINGKVK
DLDDNVREEI VKQNKEYASQ ALRVLAVAYK PLDGENNLHI DNVEKGLIFL GLMGMIDPPR
REVADSVKLC KQAGIRPVMI TGDYSLTARA IAEELGIYKN GDKIITGSEL EDMNPEELKE
AVSLTTVYAR VSPHHKSKIV QALKDSNEVV AMTGDGVNDA PALKKADIGV AMGITGTDVA
KEAADMVLTD DNFASIVSAV EEGRGIYSNI KKFIHFLLSC NVGEIITLFL AIIVGLPRPL
IPIQILWVNL VTDGFPALAL GVDPAAPDLM EKPPRDPDEG VFAGKMGVNI ISQGLFIGLL
TLVIFFLGLH YFSLPVGQTM AFATLSFSQL IQALNARSRE YSLFRLGILT NKYLILAIMI
SGLLQLGVMF IPFLQAAFKV IPLTGTQWLI VLLASLTPLP YVEILKALGI TREE